Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | AETVQTAHINRHPSPRHDLNPSTAADKAEPVSLREKPDGDDLDSLDDEAEDVQGEDGDDDDIPYSVLRPTPRRPAHQLPPLPDLRFEQSYLRSIAKADTWWKVAWIT |
1 | 2vbeA3 | 0.21 | 0.14 | 4.45 | 0.94 | SPARKS-K | | ------------PSVNGIINVPVA-VGATSGSAAIPNPGNLTVRSLFGDPASSGDKVSVSGVTINVTRPSPVGV--ALPSVEYLAI--------------------- |
2 | 6em3B | 0.10 | 0.09 | 3.45 | 0.39 | FFAS-3D | | TRHEEVMPLTAVPEPKRRFVPSKNEAKRVMKIVRAIREGRIIPPKKLKEMKEKEKIENYQYDLWGLRAPKLPPPTNSYNPPEEYLLSPEEKEAWENTEY-------- |
3 | 2ktsA | 0.10 | 0.07 | 2.80 | 0.24 | HHpred | | --RFVLESVNGKPVTS----------DKNPPEISFGEKMMIS-G--SMCNRFGEGKLSNGELTAKGLAMT-R---MMCAN-PQNELDNTISEMLKEGAQVDLTA--- |
4 | 2ze9A | 0.12 | 0.11 | 3.97 | 0.77 | MUSTER | | AKVWLATSNGASCMPSEAGSAPAEPTGDVPVIAVGGLGVGIKESDPSSGYHPDLPTAPDTKCTVGLHDNTNADRDYDTVN----PEENALRSLIASARS--HVEISQ |
5 | 2nvwA | 0.05 | 0.01 | 0.46 | 0.48 | CNFpred | | -------------------------------------------------------------------------------------VAKTHFLAIQQLSSQFQIVALY |
6 | 4jp0A2 | 0.15 | 0.06 | 1.88 | 0.55 | HHsearch-2 | | ------------------------------------------------------------QLPQKPI-------IDKLKDYPKYSGNID-NGTSPQLMGWTLVPCIM |
7 | 4b03D | 0.07 | 0.07 | 2.66 | 0.89 | Neff-PPAS | | PDDVDCWCNATE----TWVTYGTCSQTGEHRRDKRSVALAPHVGLGLETRTETWMSSEGAWKQIQKVETWALGHPGFTVIALFLAH-------AIGTSITQKGIIFI |
8 | 1l0wA2 | 0.24 | 0.08 | 2.63 | 0.50 | HHsearch | | --------------------------------------------SYEEAME---------------RYG---------SDKPDLRFGLEEVGPLRQSGQEESVALA- |
9 | 2n73B | 0.14 | 0.10 | 3.50 | 0.84 | SP3 | | GAMVEARSLAVAMGDT-VVEPAPLKPTSEPTSGPPGNNGGSLLSVITEGVGELSVIDPEVAQKQEVLEKVKLLHGGVAV---------------------------- |
10 | 2nbiA2 | 0.19 | 0.17 | 5.42 | 0.53 | PROSPECTOR2 | | QPS------SQPTGPQPSSQPSECADVLELCPYDTCFLPFDDSSRPPDCTDPSVNRPDCDKLSTAIDFTCPRPDNPMFSPSPDPVCSPTMMPSPLPSPT-------E |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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