Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240 260
| | | | | | | | | | | | | |
| Seq | HELVSQEFINTFVKKGSCYLLSYNTRIDQDNCVALLPTGRLILSVDKDTYEELGLQGQPSLYSGKKPMRYIITVDLTDSAFTPDSKKYNRVIWALKDKKPLEFDFLLAWHYSGSEELSLMSYFSKYEIQAHQPKVTFNTLRNVQCPVLENNKLQGEPEVACSAQEFFEWLGAIFNNVSLENTSSSFVSTYSCPQPGTLVDPALTCTITGFIIPERIIDLLEQLCSYFKEPKLAPWATLVVHGFADSPVSWRESEHSFLKGGENLYTFVIFRN |
1 | 6ahrL | 0.65 | 0.65 | 18.47 | 3.57 | SPARKS-K | | HELITPEFISTFIKKGSCYALTYNTHIDEDNTVALLPNGKLILSLDKDTYEETGLQGHPSQFSGRKIMKFIVSIDLMELSLNLDSKKYERISWSFKEKKPLKFDFLLAWHKTGSEESTMMSYFSKYQIQEHQPKVALSTLRDLQCPVLQSSELEGTPEVSCRALELFDWLGAVFSNVDLNNEPNNFISTYCCPEPSTVVAKAYLCTITGFILPEKICLLLEHLCHYFDEPKLAPWVTLSVQGFADSPVSWEKNEHGFRKGGEHLYNFVIFNN |
2 | 6ahrL | 0.65 | 0.64 | 18.37 | 3.76 | FFAS-3D | | -ELITPEFISTFIKKGSCYALTYNTHIDEDNTVALLPNGKLILSLDKDTYEETGLQGHPSQFSGRKIMKFIVSIDLMELSLNLDSKKYERISWSFKEKKPLKFDFLLAWHKTGSEESTMMSYFSKYQIQEHQPKVALSTLRDLQCPVLQSSELEGTPEVSCRALELFDWLGAVFSNVDLNNEPNNFISTYCCPEPSTVVAKAYLCTITGFILPEKICLLLEHLCHYFDEPKLAPWVTLSVQGFADSPVSWEKNEHGFRKGGEHLYNFVIFNN |
3 | 6ahrL | 0.65 | 0.65 | 18.47 | 15.31 | HHpred | | HELITPEFISTFIKKGSCYALTYNTHIDEDNTVALLPNGKLILSLDKDTYEETGLQGHPSQFSGRKIMKFIVSIDLMELSLNLDSKKYERISWSFKEKKPLKFDFLLAWHKTGSEESTMMSYFSKYQIQEHQPKVALSTLRDLQCPVLQSSELEGTPEVSCRALELFDWLGAVFSNVDLNNEPNNFISTYCCPEPSTVVAKAYLCTITGFILPEKICLLLEHLCHYFDEPKLAPWVTLSVQGFADSPVSWEKNEHGFRKGGEHLYNFVIFNN |
4 | 6ahrL | 0.65 | 0.65 | 18.47 | 2.82 | MUSTER | | HELITPEFISTFIKKGSCYALTYNTHIDEDNTVALLPNGKLILSLDKDTYEETGLQGHPSQFSGRKIMKFIVSIDLMELSLNLDSKKYERISWSFKEKKPLKFDFLLAWHKTGSEESTMMSYFSKYQIQEHQPKVALSTLRDLQCPVLQSSELEGTPEVSCRALELFDWLGAVFSNVDLNNEPNNFISTYCCPEPSTVVAKAYLCTITGFILPEKICLLLEHLCHYFDEPKLAPWVTLSVQGFADSPVSWEKNEHGFRKGGEHLYNFVIFNN |
5 | 5d0uA | 0.13 | 0.10 | 3.43 | 0.83 | CNFpred | | -----QRVADELDKLGEEVGYSIR------FENKTSSKTLLKYMTDGQLLREAMHD---------SRYSCIILDEAHERTL-----ATDILMALLKQLSRKDLKIIVMSAT--LDAQKFQSYFFNAPLLAV-HPVEIFYTP----------------AERDYVEAAIRTVLQIHACE----------------------PEGDILLFLT--GEEEIEDACRRISLEVDEMDAGPMSVYPLYGTLQQQRIFEKAPQPFRPGGRPGRKCIVATN |
6 | 6ahrL | 0.65 | 0.65 | 18.47 | 5.07 | HHsearch-2 | | HELITPEFISTFIKKGSCYALTYNTHIDEDNTVALLPNGKLILSLDKDTYEETGLQGHPSQFSGRKIMKFIVSIDLMELSLNLDSKKYERISWSFKEKKPLKFDFLLAWHKTGSEESTMMSYFSKYQIQEHQPKVALSTLRDLQCPVLQSSELEGTPEVSCRALELFDWLGAVFSNVDLNNEPNNFISTYCCPEPSTVVAKAYLCTITGFILPEKICLLLEHLCHYFDEPKLAPWVTLSVQGFADSPVSWEKNEHGFRKGGEHLYNFVIFNN |
7 | 6ahrL | 0.65 | 0.65 | 18.47 | 4.70 | Neff-PPAS | | HELITPEFISTFIKKGSCYALTYNTHIDEDNTVALLPNGKLILSLDKDTYEETGLQGHPSQFSGRKIMKFIVSIDLMELSLNLDSKKYERISWSFKEKKPLKFDFLLAWHKTGSEESTMMSYFSKYQIQEHQPKVALSTLRDLQCPVLQSSELEGTPEVSCRALELFDWLGAVFSNVDLNNEPNNFISTYCCPEPSTVVAKAYLCTITGFILPEKICLLLEHLCHYFDEPKLAPWVTLSVQGFADSPVSWEKNEHGFRKGGEHLYNFVIFNN |
8 | 6ahrL | 0.65 | 0.64 | 18.37 | 8.13 | HHsearch | | HELITPEFISTFIKKGSCYALTYNTHIDEDNTVALLPNGKLILSLDKDTYEETGLQGHPSQFSGRKIMKFIVSIDLMELSLNLDSKKYERISWSFKEKKPLKFDFLLAWHKTGSEESTMMSYFSKYQIQEHQPKVALSTLRDLQCPVLQSSELEGTPEVSCRALELFDWLGAVFSNVDLNNEPNNFISTYCCPEPSTVVAKAYLCTITGFILPEKICLLLEHLCHYFDEPKLAPWVTLSVQGFADSPVSWEKNEHGFRKGGEHLYNFVIFN- |
9 | 1ii7a | 0.14 | 0.12 | 4.15 | 0.73 | PROSPECTOR2 | | MKFAFAEAFKNALENVDFILIAHSSRPSSIPVFAIQRGPSV-----LNLLEDFGLVYVIGMRKEKVENEYLTSERLGNGEYYMSSAWFEANKEILKRLFRPTDNAILMLRGEDYFEIGLGDLPEGYLYYALKRYETSYSGSPVVYPGSLERW------------------DFGDYEVRYEWDGIKFKERYGVNKGEIKVRPFIDVKIK--GSEEEIRKAIKRLIPLIPKN---AYVRLNIGWRKPFDLTEIKELL-----NVEYLKIDTWRI |
10 | 6ahrL | 0.65 | 0.64 | 18.37 | 4.01 | SAM | | -ELITPEFISTFIKKGSCYALTYNTHIDEDNTVALLPNGKLILSLDKDTYEETGLQGHPSQFSGRKIMKFIVSIDLMELSLNLDSKKYERISWSFKEKKPLKFDFLLAWHKTGSEESTMMSYFSKYQIQEHQPKVALSTLRDLQCPVLQSSELEGTPEVSCRALELFDWLGAVFSNVDLNNEPNNFISTYCCPEPSTVVAKAYLCTITGFILPEKICLLLEHLCHYFDEPKLAPWVTLSVQGFADSPVSWEKNEHGFRKGGEHLYNFVIFNN |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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