Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | FEKMMQAAAKKTSIFDHNACFILCDFMEEALNIYVHFQEASKFIDWRFWLDVCQKILESENTMSEIRLFALIYCVWDIITADDRRKEVLCLDWLLTEKFFDKYFNHWCPMIRAYYMRLLCWRV |
1 | 3gjxA | 0.06 | 0.06 | 2.54 | 0.78 | SPARKS-K | | IPQIFDAVFECTLNMYPEHRTNFFLLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILFTLLQNVAQEEAAAQSFYQTYFCDQHIFSVVTDTSHTMHASILAYMFNLVE |
2 | 4ffbC2 | 0.08 | 0.07 | 2.60 | 0.81 | FFAS-3D | | -STWTPLLVEKGTSSRATTKTQSMSCILSLCG---------LDTSITQSVELVIPFFEKKLPKLIAAAANCVYELMAAFGLTVQTFLPELLKHV------PQLAGHGDRNVRSQTMNLIV--- |
3 | 3fgaB2 | 0.14 | 0.12 | 4.18 | 0.37 | HHpred | | -EPVVMALLKYWPKTHSPKEVMFLNELEEILDVIE-----PSEFVMEPLFRQLAKCVSSPHFQVAERALYYWNNEMSLISDNAA----KILPIMF-PSLYRNSKTHWNKTIHGLIYNALK--- |
4 | 4rv1A1 | 0.12 | 0.11 | 3.77 | 0.85 | MUSTER | | -MNDVEKLVKLLTSTDSETQKEAARDLAEIASGPASA---IKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIAS---GPDEAIKAIVDAGGV--EVLVKLLTSTDSEVQKEAARAL-ANI |
5 | 3gjxA | 0.06 | 0.06 | 2.53 | 0.76 | CNFpred | | IPQIFDAVFECTLNMYPEHRTNFFLLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILFTLLQNVAQEEAAAQSFYQTYFCLQHIFSVVTD-GLTMHASILAYMFNLVE |
6 | 3fgaB2 | 0.14 | 0.13 | 4.41 | 0.66 | HHsearch-2 | | TEPVVMALLKYWPKTHSPKEVMFLNELEEILDVIE-----PSEFVMEPLFRQLAKCVSSPHFQVAERALYYWNN-EYIMSLISDNA-----AKIL-PIMFPSLKTHWNKTIHGLIYNALKMEM |
7 | 1qgkA2 | 0.05 | 0.05 | 2.28 | 0.74 | Neff-PPAS | | LQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCEDDIVPHVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPE---PSQLKPLVIQAM--PTLIELMKDPSVVVRDTAAWTVGRIC |
8 | 3fgaB2 | 0.15 | 0.13 | 4.39 | 0.87 | HHsearch | | TEPVVMALLKYWPKTHSPKEVMFLNELEEILDVIE-----PSEFVMEPLFRQLAKCVSSPHFQVAERALYYWNNEMSLISDN-A-------AKIL-PIMFPSLKTHWNKTIHGLIYNALKLM- |
9 | 4qmiA1 | 0.09 | 0.07 | 2.82 | 0.74 | SP3 | | TSELVSKIGDK----NWKIRKEGLDEVAGIINDAKFIQPNIG-----ELPTALKGRLNDSNKILVQQTLNILQQLAVAMGPNIKQHVKNLGIPIITDS---------KNNVRAAALATVN-AW |
10 | 5x9aA | 0.12 | 0.12 | 4.29 | 0.62 | PROSPECTOR2 | | NQKLAEELYKCQKHFTKTEVESLIICYKNFRDILHQKFNMTEDISLTEWVEGLSVFLRGTLDEKMEYTFTVMFQMLKTCLVPDEGIKDLVEIALLIEPLLLEAFGKCDEKSSEIFEYHVLGVK |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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