Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | WFKNFAGIRQSDFEMLRVPNPSVEFCIHVTMRSVQTGALLGSVLGPLSAMLFEAKHMNSKKLTDKFVSGGTNGALIGAVMGPLLTYLALRDMNTVRLYDKCYRLRFDKQQLWQDRTCIVSAALGYLSSGSLGFVVGLDLAT |
1 | 5m1mA | 0.10 | 0.09 | 3.40 | 0.77 | SPARKS-K | | --AHEILIAETEAFLKNVPETRTAIISAIACKSAAKLIKGEATTMHIVMRCLYPEIKPWKKASDMLNKATIRKQMKAAGFLGVESMMKMRAFRDDQIMEMVEEVYDHDDYTPDIRIGTITAWLRCKNKKS----------- |
2 | 5gupV | 0.16 | 0.12 | 4.03 | 0.84 | FFAS-3D | | ------------HKYSDIPEGT--ECHRKAYASTSIGGATGLIVSAYSIAL--KPPASFLEGVARTGRYTFTSAAIGAIFGLTSCISA--------------QVREKPDDPL--NYFIGGCAGGLTLGARTRAAACAYMGL |
3 | 5gupV | 0.14 | 0.11 | 3.65 | 0.28 | HHpred | | --------KTLLHKYSDIPEGTECH--RKAYASTSIGGATGLIVSAYSIALK--PPASFLEGVARTGRYTFTSAAIGAIFGLTSCSAQVREPDDPL------------------NYFIGGCAGGLTLGARTRAAACAYMG- |
4 | 5gupV | 0.16 | 0.13 | 4.27 | 0.77 | MUSTER | | -------AKTLLHKYSDIPEGT---CHRKAYASTSIGGATGLIVSAYSIALK--PPASFLEGVARTGRYTFTSAAIGAIFGLTSCISAQREKPD----D-----PLN----YFIGGCAGGLTLGARTRSYGIGAAAAYMGL |
5 | 5xtcr | 0.12 | 0.10 | 3.49 | 0.81 | CNFpred | | --------------------LPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTLILNPLTKHMAYPFLVLSLWGMIMTSSICLLIAYSSIS-----HMALVVTAILIQT--PWSFTGAVILMIAHGLTSSLLFCLANSNYER |
6 | 5xtcV | 0.12 | 0.09 | 3.28 | 0.52 | HHsearch-2 | | -------APKVFRQYWDIPDGTDCHR--KAYSTTSIASVAGLTAAAYRVTLN--PPGTFLEGVAKVGQYTFTAAAVGAVFGLTTCSAHVREPDDP--------------LN----YFLGGCAGGLTLGARIGAAACVYFGI |
7 | 4tkrA | 0.08 | 0.07 | 2.76 | 0.75 | Neff-PPAS | | LLWGLLHFLTGKAYILM--------PSQAIIEYILAFSFIAFSGVFSKQVRSNLAANQLKKAIEWAWGTMIIGGVARYFWHYVAGVLFWGAY--------------AFQGWGAQLFSIVMNGASCLGTVLVSGIIISILLK |
8 | 5xtcV | 0.11 | 0.09 | 3.09 | 0.50 | HHsearch | | -------APKVFRQYWDIPDGTDCHR--KAYSTTSIASVAGLTAAAYRVTLN--PPGTFLEGVAKVGQYTFTAAAVGAVFGLTTCSAHVREPDDPL------------------NYFLGGCAGGLTLGARTHAAACVYFG- |
9 | 6a2jA3 | 0.12 | 0.09 | 3.24 | 0.71 | SP3 | | --------------PLQIGKKMQFHMIGILIYSYIVVLLLFVWIIVAAVHAITSYKDQ--KQIFWGWISCLIFITLQALSGIMIVYSELA------------------LGFALAHSFFIACLFGVLCYFLLLIARFRYES- |
10 | 5h7cA3 | 0.09 | 0.09 | 3.46 | 0.62 | PROSPECTOR2 | | LAEVAKEATDKELVIYSTDSELVNEIVKQLAEVAKEATDKELVIYIVKILAELAKQSTDSELVNEIVKHIEKILEELEQQSAFYEILSLPNLNEEQRNAFIQSLKDDPSQSANLLAEAKSLNVNQAVKQ----LAEKAKEA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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