Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | PARTIPFVWNLVTSGYIEQSIFGVVVSTLGLLFIGKLLEPVWGSREFLKFIFVVNFLTSICIFITAIALYYITRKETYLYMPLSGFHGVLSGFLVGIKQ |
1 | 2ic8A | 0.15 | 0.13 | 4.41 | 1.86 | SPARKS-K | | FDPTLKEFWRYFTHALMHFSLMHILFNLLWWWYLGGAVEKRLGSGKLIVITLISALLSGYVQQKFSG-------------PWFGGLSGVVYALMGYVWL |
2 | 2nr9A | 0.17 | 0.13 | 4.31 | 1.70 | FFAS-3D | | --------WRYISHTLVHLSNLHILFNLSWFFIFGGMIERTFGSVKLLMLYVVASAITGYVQNYVS-------------GPAFFGLSGVVYAVLGYV-- |
3 | 2ic8A | 0.14 | 0.12 | 4.13 | 1.31 | HHpred | | FDPLKFEFWRYFTHALMHFSLMHILFNLLWWWYLGGAVEKRLGSGKLIVITLISALLSGYVQQKFS-------------GPWFGGLSGVVYALMGYVW- |
4 | 2nr9A | 0.16 | 0.14 | 4.69 | 1.48 | MUSTER | | YEEQDSEVWRYISHTLVHLSNLHILFNLSWFFIFGGMIERTFGSVKLLMLYVVASAITGYVQNYVSG-------------PAFFGLSGVVYAVLGYVFI |
5 | 2nr9A | 0.17 | 0.14 | 4.67 | 0.97 | CNFpred | | --EQDSEVWRYISHTLVHLSNLHILFNLSWFFIFGGMIERTFGSVKLLMLYVVASAITGYVQNYVSG-------------PAFFGLSGVVYAVLGYVFI |
6 | 2nr9A | 0.16 | 0.14 | 4.69 | 2.83 | HHsearch-2 | | AYEQDSEVWRYISHTLVHLSNLHILFNLSWFFIFGGMIERTFGSVKLLMLYVVASAITGYVQNYVS-------------GPAFFGLSGVVYAVLGYVFI |
7 | 2ic8A | 0.14 | 0.12 | 4.14 | 1.68 | Neff-PPAS | | DPTLKFEFWRYFTHALMHFSLMHILFNLLWWWYLGGAVEKRLGSGKLIVITLISALLSGYVQQKFSG-------------PWFGGLSGVVYALMGYVWL |
8 | 2nr9A | 0.16 | 0.14 | 4.68 | 3.34 | HHsearch | | AYEQDSEVWRYISHTLVHLSNLHILFNLSWFFIFGGMIERTFGSVKLLMLYVVASAITGYVQNYVS-------------GPAFFGLSGVVYAVLGYVF- |
9 | 2ic8A | 0.14 | 0.12 | 4.14 | 0.93 | PROSPECTOR2 | | ERALKFEFWRYFTHALMHFSLMHILFNLLWWWYLGGAVEKRLGSGKLIVITLISALLSGYVQQKFS-------------GPWFGGLSGVVYALMGYVWA |
10 | 2nr9A | 0.18 | 0.14 | 4.62 | 1.02 | SAM | | ---QDSEVWRYISHTLVHLSNLHILFNLSWFFIFGGMIERTFGSVKLLMLYVVASAITGYVQNYVS-------------G-AFFGLSGVVYAVLGY--- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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