Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | WEFRSLEDLDKWTLSSDQEIGGKSQVSLKLGRNNQTALFYGTLNTEVPRDGETRYSGYCTMKSKTPLGAFNRKLHYDWSNFNTLYLRVRGDGRPWMVNIKSDSYFSQQRDDLYNYFIYTQGGPYWQDIKIPFSKFFLSSRGRIQDNQHPLWTDKITAVGFTLGDKANGPFQLEI |
1 | 1v0aA | 0.18 | 0.14 | 4.68 | 1.39 | SPARKS-K | | DDFEGVLNWGSYSGEG---------AKVSTKKTGN-----GEVSYTGTTD------GYWGTVYSLPD--------GDWSKWLKISFDIKSVANEIRF-IAEKSINGVGDGEHWVYSITPDSS--WKTIEIPFSSFRRRLDYQPGQDSGTLDLDNIDSIHFY---ANNKSGKFVV |
2 | 1v0aA | 0.19 | 0.16 | 5.17 | 1.25 | FFAS-3D | | -DFEG---VLNWGSYSGE--GAKVSTKIVSGKTGNGEVSY-----------TGTTDGYWGTVYSLP--------DGDWSKWLKISFDIKSVANEIRFIAEKSI---NGVGDGEHWVYSITPDSSWKTIEIPFSSFRRRLDYQPPQDSGTLDLDNIDSIHFYANNK-SGKFVVD- |
3 | 1wkyA2 | 0.14 | 0.10 | 3.55 | 1.23 | HHpred | | YDFEE--STQGWTGSSL--SRGPWTVTE-WSSKG-NHSLKADIQMS-------SNSQHY-LHV-I--------QNRSLQQNSRIQATVKHAGMTARLYVKTGHGY-----TWYSGFVPING-SSGTTLSLDLSNV--------------QNLSQVREIGVQFQSNSSGQTSIYI |
4 | 1v0aA | 0.20 | 0.17 | 5.32 | 1.62 | MUSTER | | DDFEGV---LNWGSYSGEG----AKVSTKIVSGKT----NGEVSYTGTTD------GYWGTVYSLP--------DGDWSKWLKISFDIKSVANEIRFIAEK-SINGVGDGEHWVYSITP--DSSWKTIEIPFSSFRRRLDQPPGQDSGTLDLDNIDSIHFY---ANNKSGKFVV |
5 | 1v0aA | 0.22 | 0.19 | 5.97 | 1.69 | CNFpred | | DDFEGV---LNWGSYSG--EGAKVSTKIVSGKTGNGMEVSYTGTT----------DGYWGTVYSLP--------DGDWSKWLKISFDIKSV-NEIRFMIAEKSINGVGDGEHWVYSITPD--SSWKTIEIPFSSFRRRLQPPGQDMSGTLDLDNIDSIHFMYANNKSGKFVVDN |
6 | 1v0aA | 0.21 | 0.17 | 5.47 | 2.17 | HHsearch-2 | | DDFEGVL---NWGSYSG--EG--AKVSTKIVKTGNG-EVSYTGT----------TDGYWGTVYSLP--------DGDWSKWLKISFDIKSVANEIRF-IAEKSINGVGDGEHWVYSITPD--SSWKTIEIPFSSFRRRLDYQPPGQSGTLDLDNIDSIHFYA---NNKSGKFVV |
7 | 1v0aA | 0.17 | 0.14 | 4.54 | 1.95 | Neff-PPAS | | -DFEGVLNWGSYSGEG-------AKVSTKIVSKTGNGEVSYTGTTD----------GYWGTVYSLP--------DGDWSKWLKISFDIKSVANEIRFIAEKSI---NGVGDGEHWVYSITPDSSWKTIEIPFSSFRRRLDYQPGQDSGTLDLDNIDSIHFYANN---KSGKFVV |
8 | 1wkyA2 | 0.13 | 0.10 | 3.39 | 2.80 | HHsearch | | YDFEE--STQGWTGSSL--SRGPWTVTE-WSSKG-NHSLKADIQMS-------SNSQHY-LHV-I--------QNRSLQQNSRIQATVKHAGMTARLYVKTGHGY-----TWYSGFVPIN-GSSGTTLSLDLSNV--------------QNLSQVREIGVQFQSNSSGQTSIY- |
9 | 1v0aA | 0.17 | 0.14 | 4.71 | 1.16 | PROSPECTOR2 | | DDFEGVLNWGSYSG------EGAKVSTKIVSGKTGNGEVSYT----------GTTDGYWGTVYSLPD--------GDWSKWLKISFDIKSVANEIRF-IAEKSINGVGDGEHWVYSI--TPDSSWKTIEIPFSSFRRRLDYQPPGDSGTLDLDNIDSIHF---YANNKSGKFVV |
10 | 1v0aA | 0.19 | 0.15 | 4.83 | 0.96 | SAM | | -DFEGVL---NWG------SYSGEGAKVSTKIVGNG-EVSYTGTTD-------GYWGTV---YSLPD--------GDWSKWLKISFDIKSVANEIRF-IAEKSINGVGDGEHWVYSITPD--SSWKTIEIPFSSFRRRLDYQPPGQSGTLDLDNIDSIHFYA---NNKSGKFVV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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