>PF08497 (316 residues) FLPMSRAEMDRLGWDACDIVLVTGDAYVDHPSFGMAIIGRLLESQGYRVGIIAQPDWHSA EPFKALGKPRLFFGVTGGNLDSMVNRYTSDRRLRSDDAYTPGGEGGKRPDRCTIVYTQRC REAYKDVPVILGGIEASLRRIAHYDYWSDKVRRSILADAKADLLIYGNAERAVIEVANRI AAGEAPRDLTSVRGVALFRKVPEHFTELHADDLDSADEAATRHPGDTVIRLPSFEQVEND REAYARASRVLHREANPGNARPLVQRHGDRDLWLNPPPIPLTTEEMDQVYDLPYARAPHP AYGDAKIPAWDMIKFS |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 | | | | | | | | | | | | | | | | |||||||||||||
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Seq | FLPMSRAEMDRLGWDACDIVLVTGDAYVDHPSFGMAIIGRLLESQGYRVGIIAQPDWHSAEPFKALGKPRLFFGVTGGNLDSMVNRYTSDRRLRSDDAYTPGGEGGKRPDRCTIVYTQRCREAYKDVPVILGGIEASLRRIAHYDYWSDKVRRSILADAKADLLIYGNAERAVIEVANRIAAGEAPRDLTSVRGVALFRKVPEHFTELHADDLDSADEAATRHPGDTVIRLPSFEQVENDREAYARASRVLHREANPGNARPLVQRHGDRDLWLNPPPIPLTTEEMDQVYDLPYARAPHPAYGDAKIPAWDMIKFS | |||||||||||||||||||
1 | 5ul2A | 0.09 | 0.08 | 2.85 | 1.10 | SPARKS-K | CFLSCEELYEHL--ELPTVTLVNLCVPIPRLNLSTGTLSSYLRKEQAKVELIDQTTINQIIKNLLDSQPDI-IGLSVN----------------------------FGQKKLAFEILDLIYSHIENSIITVGNVIPSFSP------------EQFFERYPSLLICDKEGEYTLRDLIK----LKKELKLDEVNGISYVDESGE---------VKHNVA--ETVNFKEEVPTPSLDILGEISK----FRGALTLETSRGCDYSRCTFCPRSWRPLSVEQTLKQLDDILRAGKHFNIKPHIYADEEFIGELPNGTEAQ | |||||||||||||
2 | 6fd2B1 | 0.07 | 0.03 | 1.46 | 1.14 | FFAS-3D | --------------RLGTVLLVSPKEDFLLPPLDLMRLAGVLREDADDIAIADEEVTGVVPSV---EPGTTVICHVS-----------------------------LPSLLEDAERLATFRAQGARC-YAYTSIRSP------------AQWRTLFERGGCEGVLLPESISFARAALA---------GDHTVPGLVTPDSRHHQPAFGDLAAEPLPARDLVDHTPYMFPPI------------------------------------------------------------------------------------- | |||||||||||||
3 | 5ul2A | 0.09 | 0.07 | 2.56 | 3.41 | HHpred | --LSCEELY--EHLELPTVTLVNLCVIIPRLNLSTGTLSSYLRKEQAKVELIDQVGINQIIKNLLDSQPDI-IGLSVN-----------------------------FGQKKAFEILDLIYSHGDSSIITVGNVIPSFSP------------EQFFERYPSLLICDKEGEYTLRDLIK-LKKEL---KLDEVNGISYVDES--G------EVKHNVA---ETVNFKEEVPTPSLDILGEISKF----RGALTLETSRGCDYR-CTFCPRSWRPLS---VEQQLDDIGKHFNIKPHIYADEEFIGELPAQR------ | |||||||||||||
4 | 2rf1A | 0.10 | 0.09 | 3.16 | 0.66 | MUSTER | ------------EPESCGTVRFSDVGWTDIT-ATTATATTILEALGYETDVKVL-SVPVTYTSLKNKDIDVFLGNWMPTMEADIAPYREDKSVETVRENLAGAKYT-NAKGAELGIFKDIAAHKDEL----DGKIYGIEP----GNDGNRLIIDMVEKGTFDEVVESSEQGMLAQVARAEKSGDPI--------VFLGWEPHPMNANFKLTYLSGGDDVFGPNYGGATVHTAGYTTECPNVDKLLQNLSFSLQMEN-----EIMGKILND----GEDPEKAAAAWLKDNPQS-LSGVATK---DGG-DGLAAVKAA | |||||||||||||
5 | 5ul2A | 0.09 | 0.07 | 2.62 | 1.69 | CNFpred | -------ELYEH-LELPTVTLVNLCVIEPRLNLSTGTLSSYLRKELAKVELIDMTTINQIIKNLLDSQPDIIGLSVNF-----------------------------GQKKLAFEILDLIYSHILSSIITVGNVIPSF------------SPEQFFERYPSLLICDKEGEYTLRDLIKMLKKEL---KLDEVNGISYVDES---------GEVKHN--VAETVNFKEEVPTPSLDILGEIS----KFRGALTLETSRGCDYSRCTFCPR-WRPLSVEQTLKQLDDILRAGKH--------------FNIKPHIYMA | |||||||||||||
6 | 5ul2A | 0.09 | 0.07 | 2.66 | 2.33 | HHsearch-2 | YYKSCEELY--EHLELPTVTLVNLCVIIPRLNLSTGTLSSYLRKEQAKVELIDQVTINQIIKNLLDSQPDI-IGLSVN-----------------------------FGQKKAFEILDLIYSHGDSSIITVGNVIPSFSP------------EQFFERYPSLLICDKEGEYTLRDLIK-LKKEL---KLDEVNGISYVDES--G------EVKHNVA---ETVNFKEEVPTPSLDILGEISKF----RGALTLETSRGCDYR-CTFCPRSWRPL---SVEQQLDDIGKHFNIKPHIYADEEFIGELPAQR-IIDIC | |||||||||||||
7 | 2rf1A | 0.10 | 0.09 | 3.29 | 0.75 | Neff-PPAS | -----------EPESCGTVRFSDVG--WTDITATTATATTILEALGYETDVKVL-SVPVTYTSLKNKDIDVFLGNWMPTMEADIAPYREDKSVETVRENLAGAKYTAKGAELGIKDFKDIAAHKDELDGKIYGIE----PGNDGNRLIIDMVEKGTFDLKGFEVVESSEQGMLAQVARAEKSGDP--------IVFLGWEPHPMNANFKLTYLSGGDDVFGPNYGGATVHTNVRAGYTTECPNVDKLLQNL------SFSLQMENEIMGKILNDGEDPEKAAAAWLKDNPQS-IEPWLSGVATKDGGDGLAAVKAA | |||||||||||||
8 | 5ul2A | 0.09 | 0.07 | 2.66 | 3.74 | HHsearch | YYLSCEELYE--HLELPTVTLVNLCVIIPRLNLSTGTLSSYLRKEQAKVELIDQVTINQIIKNLLDSQPDI-IGLSVN-----------------------------FGQKKAFEILDLIYSHGDSSIITVGNVIPSFSP------------EQFFERYPSLLICDKEGEYTLRDLIK-LKKEL---KLDEVNGISYVDES--G------EVKHNVA---ETVNFKEEVPTPSLDILGEISKF----RGALTLETSRGCDYR-CTFCPRSWRPLS---VEQQLDDIGKHFNIKPI-YADEEFIGELPAQRI-IDI- | |||||||||||||
9 | 6fd2B | 0.10 | 0.08 | 2.83 | 1.27 | PROSPECTOR2 | RLPKTSFGRDLQRTYAGGLGTVCKDEDFLLPPLDLMRLAGVLREDADDIAIADEEVTGVVPS---VEPGTT-VICHVSLPSL----------------------------LEDAERLATFRA-QGARCYAYTSIRSP------------AQWRTLFERGGCEGVLLPESISFARAALA---------GDHTVPGLVTPDSLLDPRHHQ------------PAFGDLAAEPLPARDLVDHTPYMFPPITGITSINGSFGCPYP-CRFYGRKIRTYPV---ERIVAEFRQCAELGITTSHNAVMHTDELSIGDLERAA | |||||||||||||
10 | 5ul2A | 0.09 | 0.06 | 2.38 | 2.91 | SAM | --------------ELPTVTLVNLCVIIPRLNLSTGTLSSYLRKEQAKVELID-QVINQIIKNLLDSQPDI-IGLSVN-----------------------------FGQKKAFEILDLIYSHGDSSIITVGNVIPSFSP------------EQFFERYPSLLICDKEGEYTLRDLIK-LKKEL---KLDEVNGISYVDE---G------EVKHNV-A--ETVNFKEEVPTPSLDILGEISKF----RGALTLETSRGCDYR-CTFCP--LRSWRPLSVEQQLDDIGKHFN------------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |