Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240 260
| | | | | | | | | | | | | |
| Seq | APLTIVCDGCFSNLRRALCSPKVDVPSCFVGLVLENCQLPHANHGHVVLANPSPILFYPISSTEVRCLVDVPGQKVPSIANGEMAKYLKTVVAPQIPPEIYDSFIAAIDKGSIRTMPNRSMPAAPHPTPGALLMGDAFNMRHPLTGGGMTVALSDIVVLRNLLKPLRNLHDASALCKYLESFYTLRKPVASTINTLAGALYKVFSASPDQARNEMRQACFDYLSLGGVFSNGPIALLSGLNPRPLSLVAHFFAVAIYGVGRLMLPLPSPKRMW |
1 | 6c6nA | 0.46 | 0.45 | 13.24 | 2.17 | SPARKS-K | | APLTVVADGLFSKFRKSLVSNKVSVSSHFVGFLMKNAPQFKANHAELILANPSPVLIYQISSSETRVLVDIRGE-----MPRNLREYMVEKIYPQIPDHLKEPFLEATDNSHLRSMPASFLPPSSVKKRGVLLLGDAYNMRHPLTGGGMTVAFKDIKLWRKLLKGIPDLYDDAAIFEAKKSFYWARKTHSFVVNILAQALYELFSATD-DSLHQLRKACFLYFKLGGECVAGPVGLLSVLSPNPLVLIGHFFAVAIYAVYFCFKSEPKPRALL |
2 | 6c6nA | 0.46 | 0.45 | 13.24 | 2.97 | FFAS-3D | | APLTVVADGLFSKFRKSLVSNKVSVSSHFVGFLMKNAPQFKANHAELILANPSPVLIYQISSSETRVLVDIRGEMPRN-----LREYMVEKIYPQIPDHLKEPFLEATDNSHLRSMPASFLPPSSVKKRGVLLLGDAYNMRHPLTGGGMTVAFKDIKLWRKLLKGIPDLYDDAAIFEAKKSFYWARKTSHFVVNILAQALYELFSATD-DSLHQLRKACFLYFKLGGECVAGPVGLLSVLSPNPLVLIGHFFAVAIYAVYFCFKSEPKPRALL |
3 | 6c6nA | 0.47 | 0.46 | 13.34 | 10.82 | HHpred | | APLTVVADGLFSKFRKSLVSNKVSVSSHFVGFLMKNAPQFKANHAELILANPSPVLIYQISSSETRVLVDIRG-EMPR----NLREYMVEKIYPQIPDHLKEPFLEATDNSHLRSMPASFLPPSSVKKRGVLLLGDAYNMRHPLTGGGMTVAFKDIKLWRKLLKGIPDLYDDAAIFEAKKSFYWARKTHSFVVNILAQALYELFSATDD-SLHQLRKACFLYFKLGGECVAGPVGLLSVLSPNPLVLIGHFFAVAIYAVYFCFKSETKPRALL |
4 | 6c6nA | 0.47 | 0.46 | 13.34 | 1.56 | MUSTER | | APLTVVADGLFSKFRKSLVSNKVSVSSHFVGFLMKNAPQFKANHAELILANPSPVLIYQISSSETRVLVDIRGEMPRN-----LREYMVEKIYPQIPDHLKEPFLEATDNSHLRSMPASFLPPSSVKKRGVLLLGDAYNMRHPLTGGGMTVAFKDIKLWRKLLKGIPDLYDDAAIFEAKKSFYWARKTHSFVVNILAQALYELFSAT-DDSLHQLRKACFLYFKLGGECVAGPVGLLSVLSPNPLVLIGHFFAVAIYAVYFCFKSEPWPRALL |
5 | 3rp6A | 0.16 | 0.14 | 4.51 | 1.48 | CNFpred | | GDLLIAADGSHSALRPWVLGFTPQRRYAGYVNWNGLVEIDEGDQWTTFVGEGKRVSLMPVSAGRFYFFFDVPLPAGLAEDRDTLRADLSRYFA-GWAPPVQKLIAALDP-QTTNRIEIHDIEFSRLVRGRVALLGDAGHSTTPDIGQGGCAAMEDAVVLGAVFRQTR------DIAAALREYEAQRCDRVRDLVLKARKRCDITHGKDMQLTEAWYQELREE--TGERIINGMCDTILSGPLG------------------------------ |
6 | 6c6nA | 0.46 | 0.45 | 13.24 | 1.19 | HHsearch-2 | | APLTVVADGLFSKFRKSLVSNKVSVSSHFVGFLMKNAPQFKANHAELILANPSPVLIYQISSSETRVLVDIRGEM-----PRNLREYMVEKIYPQIPDHLKEPFLEATDNSHLRSMPASFLPPSSVKKRGVLLLGDAYNMRHPLTGGGMTVAFKDIKLWRKLLKGIPDLYDDAAIFEAKKSFYWARKTSSFVVNILAQALYELFSATD-DSLHQLRKACFLYFKLGGECVAGPVGLLSVLSPNPLVLIGHFFAVAIYAVYFCFKSEPWPRALL |
7 | 6c6nA | 0.46 | 0.45 | 13.24 | 2.44 | Neff-PPAS | | APLTVVADGLFSKFRKSLVSNKVSVSSHFVGFLMKNAPQFKANHAELILANPSPVLIYQISSSETRVLVDIRGEMPRN-----LREYMVEKIYPQIPDHLKEPFLEATDNSHLRSMPASFLPPSSVKKRGVLLLGDAYNMRHPLTGGGMTVAFKDIKLWRKLLKGIPDLYDDAAIFEAKKSFYWARKTHSFVVNILAQALYELFSATD-DSLHQLRKACFLYFKLGGECVAGPVGLLSVLSPNPLVLIGHFFAVAIYAVYFCFKSEPKPRALL |
8 | 6c6nA | 0.47 | 0.45 | 13.24 | 1.86 | HHsearch | | APLTVVADGLFSKFRKSLVSNKVSVSSHFVGFLMKNAPQFKANHAELILANPSPVLIYQISSSETRVLVDIRGEM-----PRNLREYMVEKIYPQIPDHLKEPFLEATDNSHLRSMPASFLPPSSVKKRGVLLLGDAYNMRHPLTGGGMTVAFKDIKLWRKLLKGIPDLYDDAAIFEAKKSFYWARKTSSFVVNILAQALYELFSATD-DSLHQLRKACFLYFKLGGECVAGPVGLLSVLSPNPLVLIGHFFAVAIYAVYFCFKSEPWPRAL- |
9 | 2qa1A | 0.17 | 0.15 | 5.08 | 1.89 | PROSPECTOR2 | | AAYLVGCDGGRSSVRKAAGFDFPGTAATMEMYLADIKGVELQPRMIGETLPGGMVMVGPLPGGITRIIVCERGTP-PPPSWHEVADAWKRLTGDDIAH---------AEPVWVSAFGNATRQVTEYRRGRVILAGDSAHIHLPAGGQGMNTSIQDAVNLGWKLGAVVNGTAT---EELLDSYHSERHAVGKRLLMNTQAQGLLFLSG--PEVQPLRDVLTELI-QYGEVARHLAGMVSGLEITDNPRLRARAAAWLPMALERWFGAPLTG--- |
10 | 6c6nA | 0.47 | 0.45 | 13.01 | 2.62 | SAM | | APLTVVADGLFSKFRKSLVSNKVSVSSHFVGFLMKNAPQFKANHAELILANPSPVLIYQISSSETRVLVDIRGEM-----PRNLREYMVEKIYPQIPDHLKEPFLEATDNSHLRSMPASFLPPSSVKKRGVLLLGDAYNMRHPLTGGGMTVAFKDIKLWRKLLKGIPDLYDDAAIFEAKKSFYWARKTSSFVVNILAQALYELFSATD-DSLHQLRKACFLYFKLGGECVAGPVGLLSVLSPNPLVLIGHFFAVAIYAVYFCF---------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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