Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | ELLKRTRKGTLHWKRVSVYINKKSQVIVKLKSKHIGGALSKKKKSVVYCVYDEVPAWPGHERDCAEERCYFGLRTAQGLIEFECENRTSKQKWVDAVQNLLRQV |
1 | 1eazA | 0.14 | 0.12 | 4.29 | 1.13 | SPARKS-K | | YCVKQGAVMK-NWKRRYFQLDENT--IGYFKSELEK----EPLRVIPLKEVHKVQECKQSDIMMRDN--LFEIVTTSRTFYVQADSPEEMHSWIKAVSGAIVAQ |
2 | 1eazA | 0.14 | 0.12 | 4.29 | 1.41 | MUSTER | | ACVKQGAVMK-NWKRRYFQLDENTIGYFKSEL-------EKEPLRVIP-LKEVHKVQECKQSDIMMRDNLFEIVTTSRTFYVQADSPEEMHSWIKAVSGAIVAQ |
3 | 1v5pA | 0.07 | 0.07 | 2.80 | 1.53 | Neff-PPAS | | -LDIEDNENSGKFLRRYFILDTQANCLLWYMDNPQNLAVGAGAVGSLQL-TYISKVSIATPKQKPKTPFCFVINALSQRYFLQANDQKDLKDWVEALNQASKSG |
4 | 3fm8C3 | 0.10 | 0.09 | 3.22 | 1.07 | SPARKS-K | | --NYLKEGYMEKFRKRWFTMDD-RRLMYFKDPLD-----AFARGEVFIGSKESGYTVLHGF----PWPHGITIVTPDRKFLFACETESDQREWVAAFQKAVDRP |
5 | 5efxA | 0.18 | 0.16 | 5.34 | 0.74 | FFAS-3D | | CLLWKTATGRFKDVLVLLM----TDVLVFLQEKDQKYIFPTLDKPSVVSLQN----LIVRDIANQEKGMFLISAAPPEMYEVHTASRDDRSTWIRVIQQSVRTC |
6 | 4h6yA2 | 0.17 | 0.14 | 4.72 | 0.49 | HHpred | | SLSKLSGKG---LQQRMFFLFNDVLLYTSR-----SN------QFKVHGQLP-LY---GMTIEESEDPHCLTLRGQRQSIIVAASSRSEMEKWVEDIQMAIDLA |
7 | 2rloA | 0.19 | 0.19 | 6.19 | 1.33 | MUSTER | | QLLKRSGNSLNKWKKKYVTLSSNGFLLYHPSINDYIHSTHGKLRTTVKVPGKRPPRASGSAGQAEEENFEFLIVSSTGTWHFEAASFEERDAWVQAIESQILAS |
8 | 4d0nB | 0.17 | 0.15 | 5.06 | 0.84 | CNFpred | | SVFLKNA--AGRLKEVQAVLLTDILVFLQEKDKYIFASLD--QKSTVISLKKLIVREV------HEEKGLFLISMGPEMVEVHASSKEERNSWIQIIQDTINTL |
9 | 1btkB | 0.15 | 0.15 | 5.15 | 0.55 | HHsearch-2 | | IFLKRSQQKPLNFKKCLFLLTVHKLSYYEYDFGSKKGSIDVEKITCVETVVPEKNPPPRRSMEQERFPYPFQVVYDEGPLYVFSPTEELRKRWIHQLKNVIRYN |
10 | 2p0fA | 0.17 | 0.17 | 5.67 | 1.51 | Neff-PPAS | | KIAQGGRKLRKNWGPSWVVLTGNSLVFYREPPPTAPSSGWGPAGSRPESSVDLRGAALAHGRHLSSRRNVLHIRTIPGEFLLQSDHETELRAWHRALRTVIERL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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