Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | INTKTGVVPAAAEGIKNKSDLPSDTKYTWKTTPDVTTAGNKPATVVVTYPDGSKDEVPVTVHVTN |
1 | 4hmcA4 | 0.16 | 0.15 | 5.14 | 1.32 | SPARKS-K | | TRVELDSHFDPLIGITAKDYQGNDIDVTVSGSVNTNQVGDYLLTYSVSSD-DETTNQPRKITVYE |
2 | 2kpnA | 0.27 | 0.26 | 8.03 | 1.03 | MUSTER | | ATIHVGDSFVPMAEVKEDGDLTS--KIKVDGEVDTTKAGTYVLTYTVTDSKGHEVTAKQTVTVKV |
3 | 5eq2A2 | 0.22 | 0.18 | 5.82 | 1.02 | HHsearch-2 | | TYVDRLSSLSPEAAVANPQ-IPAAARITVSA----------NGTVTITYPDSSTDTITANRVVKD |
4 | 5fq3A1 | 0.19 | 0.18 | 5.97 | 1.46 | Neff-PPAS | | IVLEKGQPFVEPGYYAEMNGEDITESVQIKGSVDVNTPGIYNLVYAAYNEDGFAKTFTRTVYVA- |
5 | 5eq2A2 | 0.23 | 0.18 | 5.80 | 1.24 | HHsearch | | TYVRLSSLSPVEAAVANPQ-IPAAARITVSA----------NGTVTITYPDSSTDTITANRVVK- |
6 | 4fcaA3 | 0.25 | 0.23 | 7.17 | 1.26 | SPARKS-K | | EPNNEKIEEKAKELVQNLG---EGVKTTGV-IQDTPEVGEKTVKVEIVDGKGNKNFIPVVVNVGY |
7 | 4hmcA4 | 0.17 | 0.17 | 5.55 | 1.40 | Neff-PPAS | | TRVELDSHFDPLIGITAKDYQGNDIDVTVSGSVNTNQVGDYLLTYSVSSDDE-TTNQPRKITVYE |
8 | 5eq2A | 0.18 | 0.15 | 5.03 | 1.24 | HHsearch | | TYVDRLSSLSPSNAVEAAAANPQIPAAAR-------ITVSANGTVTITYPDSSTDTITANRVVK- |
9 | 4m00A2 | 0.18 | 0.18 | 5.98 | 1.26 | SPARKS-K | | QSSEVYSKIATQNAVTTVTGLPSGLTFDSTNNGTPTNIGTSTISIVSTDASGNKTTTTFKYEVTR |
10 | 2kpnA | 0.22 | 0.22 | 6.82 | 1.32 | Neff-PPAS | | ATIHVGDSFVPMAEVLAIDKEDGDLKIKVDGEVDTTKAGTYVLTYTVTDSKGHEVTAKQTVTVKV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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