>PF08395 (356 residues) VFEIASLLYFTPCSYNEQRGLFVATKRNTVVFGVVLTVTIPFWVYDVRLMVTNFLSTYTT VFAAVGGIELLIYASVMLCATLNVFIKRKRITKLMNVLFLPDRILDRYSPTTKNHDRYND NGKLGTFSVIIVIMFCFKFSYHSTIETKILTIMIVSRFLAIWVLIFIYRFHARAIEQRME QLRVLCASEEFQHNISHFLDRYDRYTEQIAEVDHCYSLPVVLIFLLVMVQLLYLAENWYT ILETRTPMPITNSIFNSMLSQLWQTFYGVLGFYAISACADTSREVEETALCTRHFDDYRL QNTRAAKQIQKFLLKNLHQKKKFSACGFFDIDNTVIYMVFSSIVTYLVILIQFKQL |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | VFEIASLLYFTPCSYNEQRGLFVATKRNTVVFGVVLTVTIPFWVYDVRLMVTNFLSTYTTVFAAVGGIELLIYASVMLCATLNVFIKRKRITKLMNVLFLPDRILDRYSPTTKNHDRYNDNGKLGTFSVIIVIMFCFKFSYHSTIETKILTIMIVSRFLAIWVLIFIYRFHARAIEQRMEQLRVLCASEEFQHNISHFLDRYDRYTEQIAEVDHCYSLPVVLIFLLVMVQLLYLAENWYTILETRTPMPITNSIFNSMLSQLWQTFYGVLGFYAISACADTSREVEETALCTRHFDDYRLQNTRAAKQIQKFLLKNLHQKKKFSACGFFDIDNTVIYMVFSSIVTYLVILIQFKQL | |||||||||||||||||||
1 | 6c70A | 0.10 | 0.10 | 3.52 | 1.29 | SPARKS-K | NIRVMQGVGHFMFNYYSE--------GKKFPHRIYCIVTLLLLLLQYGMMAVNLMMESDDVDDLTANTITMLFFLHPIVKMIYFPVRSKIFYKTLAIWNNPNSHFAESNARFHALAITKMRRLLFCVAGATIFSVISWTGITFIPRLIYQFYYLVISMAVSNSLDVLFCSWLLFACEQLQHLKAIMKPMLVRSAIKYWVERHKHVVRLVTAVGDAYG----VALLLHMLTTTITLTLLAYQATKVNGVNVY-----AATVIGYLLYTLGQVFLFCIFGNRLIEESSSVMEAAYSC-HWYDGSEEAKTFVQIVCQQC-QKAMSISGAKFFTVSLDLFASVLGAVVTYFMVLVQLK-- | |||||||||||||
2 | 6c70A | 0.11 | 0.10 | 3.58 | 2.34 | FFAS-3D | -IRVMQGVGHFMFN--------YYSEGKKFPHRIYCIVTLLLLLLQYGMMAVNLMMESDDVDDLTANTITMLFFLHPIVKMIYFPVRSKIFYKTLAIWNNPNARFHAL-----AITKMRRLLFCVAGATIFSVISWTGITFIEDYQFYYLVISMAVSNSLDVLFCSWLLFACEQLQHLKAIMKPLMQEMLVRSAIKYWVERHKHVVRLVTAVGDAYGVALLLHMLTTTITLTLLAYQATKVNGVNVY---------AATVIGYLLYTLGQVFLFCIFGNRLIEESSSVMEAAYSCH-WYDGSEEAKTFV-QIVCQQCQKAMSISGAKFFTVSLDLFASVLGAVVTYFMVLVQLK-- | |||||||||||||
3 | 6c70A | 0.10 | 0.09 | 3.43 | 1.36 | HHpred | NIRVMQGVGHFMFNYYSE----GKKFPHIYCIVTLLLLLLGMMAVNL------M-MESDDVDDLTANTITMLFFLHPIVKMIYFPVRSKIFYKTLAIWNNPNSH--PLFAESNAALAITKMRRLLFVAGTIFSVISWTITFYPNAMAGHVFALFYYLVIVSNSLDVLFCSWLLFACEQLQHLKAIMKPLLVRSAIKYWVERHKHVVRLVTAVGDAYGVALLLHMLTTTITLTL---LAYQATKVNG---VNVY---AATVIGYLLYTLGQVFLFCIFGNRLIEESSSVMEAAYSCHWYD-GSEEAKTFVQ-IVCQQCQKAMSISGAKFFTVSLDLFASVLGAVVTYFMVLVQLK-- | |||||||||||||
4 | 6c70A | 0.12 | 0.11 | 3.90 | 1.39 | MUSTER | NIRVMQGVGHFMFNYYSEGKK--------FPHRIYCIVTLLLLLLQYGMMAVNLMMESDDVDDLTANTITMLFFLHPIVKMIYFPVRSKIFYKTLAIWNNPNFAESNARFHALAITKMRRLLFCVAGATIFSVISWTGITFIEDYYLVISMAVSNSLDVLFCSWLLFACEQLQHLKAIMKPLMELSATGLVRSAIKYWVERHKHVVRLVTAVGDAYGVALLLHMLTTTITLTLLAYQATKV----NGVNV-----YAATVIGYLLYTLGQVFLFCIFGNRLIEESSSVMEAAYSC-HWYDGSEEAKTFVQIVCQQ-CQKAMSISGAKFFTVSLDLFASVLGAVVTYFMVLVQLK-- | |||||||||||||
5 | 6c70A | 0.11 | 0.11 | 3.81 | 1.31 | CNFpred | NIRVMQGVGHFMFNYYS---EGKKFPHRIYCIVTLLLLLLQYGMMAVNLMMESD-----DVDDLTANTITMLFFLHPIVKMIYFPVRSKIFYKTLAIWNNPNS-HPLFAESNAHALAITKMRRLLFCVAGATIFSVISWTGI-VFALIYQFYYLVISMAVSNSLDVLFCSWLLFACEQLQHLKAIMKPL-VRSAIKYWVERHKHVVRLVTAVGDAYGVALLLHMLTTTITLTLLAYQATKVNGV---------NVYAATVIGYLLYTLGQVFLFCIFGNRLIEESSSVMEAAYSCHWYD-GSEEAKTFVQIVCQQCQ-KAMSISGAKFFTVSLDLFASVLGAVVTYFMVLVQLK-- | |||||||||||||
6 | 6c70A | 0.11 | 0.10 | 3.58 | 3.30 | HHsearch-2 | NIRVMQGVGHFMFN--YYSE-G-KKFHRIYCIVTLLLLLLQYGM-MA---VNLM-MESDDVDDLTANTITMLFFLHPIVKMIYFPVRSKIFYKTLAIWNNPNSH----PLFAESNARITKMRRLLFCVAGTISVISWTITFIENAMSAGHVFALIYLVIVSNSLDVLFCSWLLFACEQLQHLKAIMKPLLVRSAIKYWVERHKHVVRLVTAVGDAYGVALLLHMLTTTITLTLLA---YQATKVNGV--N-VYA---ATVIGYLLYTLGQVFLFCIFGNRLIEESSSVMEAAYSCHWY-DGSEEAKTFVQ-IVCQQCQKAMSISGAKFFTVSLDLFASVLGAVVTYFMVLVQLK-- | |||||||||||||
7 | 6c70A | 0.13 | 0.12 | 4.13 | 1.94 | Neff-PPAS | NIRVMQGVGHFMFNY--------YSEGKKFPHRIYCIVTLLLLLLQYGMMAVNLMMESDDVDDLTANTITMLFFLHPIVKMIYFPVRSKIFYKTLAIWNNFAESNARFHALAITKMRRLLFCVAGATIFSVISWTGITFIEDSFYYLVISMAVSNSLDVLFCSWLLFACEQLQHLKAIMKPLMELSATMLVRSAIKYWVERHKHVVRLVTAVGDAYGVALLLHMLTTTITLTLLAYQATKV---------NGVNVYAATVIGYLLYTLGQVFLFCIFGNRLIEESSSVMEAAYSC-HWYDGSEEAKTFVQIVCQQ-CQKAMSISGAKFFTVSLDLFASVLGAVVTYFMVLVQLK-- | |||||||||||||
8 | 6c70A | 0.11 | 0.10 | 3.72 | 3.64 | HHsearch | NIRVMQGVGHFMFN--YYSE--GKKFHRIYCIVTLLLLLGMMAV-NLM-------MESDDVDDLTANTITMLFFLHPIVKMIYFPVRSKIFYKTLAIWNNPNSH--PLF--AESNARITKMRRLLFVAGAIFSVISWTITFIEDPMSAGHVFALIYQFISSNSLDVLFCSWLLFACEQLQHLKAIMKPLLVRSAIKYWVERHKHVVRLVTAVGDAYGVALLLHMLTTTITLTLLA---YQATKVNG--VN-VYA---ATVIGYLLYTLGQVFLFCIFGNRLIEESSSVMEAAYSCHWY-DGSEEAKTFVQ-IVCQQCQKAMSISGAKFFTVSLDLFASVLGAVVTYFMVLVQLK-- | |||||||||||||
9 | 6c70A | 0.11 | 0.10 | 3.73 | 1.64 | PROSPECTOR2 | FIRVMQGVGHFMFNYY--------SEGKKFPHRIYCIVTLLLLLLQYGMMAVNLMMESDDVDDLTANTITMLFFLHPIVKMIYFPVRSKIFYKTLAIWAESNARFHAL-------AITKMRRLLFCVAGATIFSVISWTGITFIEDSVISMAVSNSLDVLFCSWLLFACEQLQHLKAIMKPLMELSATGLVRSAIKYWVERHKHVVRLVTAVGDAYGVALLLHMLTTTITLTLLAYQAT-----KVNGVNVY----AATVIGYLLYTLGQVFLFCIFGNRLIEESSSVMEAAYSC-HWYDGSEEAKTFV-QIVCQQCQKAMSISGAKFFTVSLDLFASVLGAVVTYFMVLVQLK-- | |||||||||||||
10 | 6c70A | 0.11 | 0.10 | 3.74 | 1.24 | SAM | -IRVMQGVGHFMFNYYSEGKKFPHRIYCIVTLLLLLLQYGMMAVNLM--------MESDDVDDLTANTITMLFFLHPIVKMIYFPVRSKIFYKTLAIWNNPNSHPLFAESRFHA-LAITKMRRLLFCVASVISWTGIRTFYPFNAMGAGHVFALIYQFAVSNSLDVLFCSWLLFACEQLQHLKAIMKPLLVRSAIKYWVERHKHVVRLVTAVGDAYGVALLLHMLTTTITLTL---LAYQATKVN------GVNVYAATVIGYLLYTLGQVFLFCIFGNRLIEESSSVMEAAYSCHWYD-GSEEAKTFVQ-IVCQQCQKAMSISGAKFFTVSLDLFASVLGAVVTYFMVLVQLK-- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |