Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | LVKNPTGFNQVLSYLLTEKQNTQIAFVINDRLADGTDISWLWDVDFEQLQQMQDKVSSFYASGIRAEDMAVRLKYAGINIDKIQIEKDYEELLNKALATTSEGQNLYILPTYTAM |
1 | 6fqbA2 | 0.35 | 0.34 | 10.12 | 3.20 | SPARKS-K | | LIKNPVGATQAIEMIKLAPYPFSLSVLLNANYADGIDTSWIWDADFEQITDMDIPE--INAGGVRHSEIARRLRVTGYPAEKITETSNLEQVLKTIEN--QDCKHAYILATYTAM |
2 | 6fqbA2 | 0.35 | 0.34 | 10.12 | 2.21 | FFAS-3D | | LIKNPVGATQAIEMIKLAPYPFSLSVLLNANYADGIDTSWIWDADFEQITDM--DIPEINAGGVRHSEIARRLRVTGYPAEKITETSNLEQVLKTIEN--QDCKHAYILATYTAM |
3 | 6fqbA2 | 0.35 | 0.34 | 10.12 | 4.21 | HHpred | | LIKNPVGATQAIEMIKLAPYPFSLSVLLNANYADGIDTSWIWDADFEQITDM--DIPEINAGGVRHSEIARRLRVTGYPAEKITETSNLEQVLKTIENQ--DCKHAYILATYTAM |
4 | 6fqbA2 | 0.35 | 0.34 | 10.12 | 3.16 | MUSTER | | LIKNPVGATQAIEMIKLAPYPFSLSVLLNANYADGIDTSWIWDADFEQITDM--DIPEINAGGVRHSEIARRLRVTGYPAEKITETSNLEQVLKTIENQ--DCKHAYILATYTAM |
5 | 3lk7A | 0.16 | 0.14 | 4.62 | 0.88 | CNFpred | | KSTNILATQKALSGFD----NTKVILIAGGLDR---------GNEFDELIPDITGLKHMVVLGESASRVKRAAQKAGV---TYSDALDVRDAVHKAYEVAQQGDVILLSPANASW |
6 | 6fqbA2 | 0.35 | 0.34 | 10.12 | 3.48 | HHsearch-2 | | LIKNPVGATQAIEMIKLAPYPFSLSVLLNANYADGIDTSWIWDADFEQITDM--DIPEINAGGVRHSEIARRLRVTGYPAEKITETSNLEQVLKTIEN-Q-DCKHAYILATYTAM |
7 | 6fqbA2 | 0.35 | 0.34 | 10.12 | 3.21 | Neff-PPAS | | LIKNPVGATQAIEMIKLAPYPFSLSVLLNANYADGIDTSWIWDADFEQITDM--DIPEINAGGVRHSEIARRLRVTGYPAEKITETSNLEQVLKTIENQ--DCKHAYILATYTAM |
8 | 6fqbA2 | 0.35 | 0.33 | 9.88 | 5.56 | HHsearch | | LIKNPVGATQAIEMIKLAPYPFSLSVLLNANYADGIDTSWIWDADFEQITDM--DIPEINAGGVRHSEIARRLRVTGYPAEKITETSNLEQVLKTIEN-Q-DCKHAYILATYTA- |
9 | 6fqbA2 | 0.35 | 0.34 | 10.12 | 1.67 | PROSPECTOR2 | | LIKNPVGATQAIEMIKLAPYPFSLSVLLNANYADGIDTSWIWDADFEQITDMDIPE--INAGGVRHSEIARRLRVTGYPAEKITETSNLEQVLKTIE--NQDCKHAYILATYTAM |
10 | 6fqbA2 | 0.35 | 0.34 | 10.12 | 1.42 | SAM | | LIKNPVGATQAIEMIKLAPYPFSLSVLLNANYADGIDTSWIWDADFEQITDM--DIPEINAGGVRHSEIARRLRVTGYPAEKITETSNLEQVLKTIENQ--DCKHAYILATYTAM |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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