Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | MQPQMPGMQQPMAPQRTGMQPMMPQRTGMQPQMPGMQQPMAPQRTGMQPMAPQRTGMQPQMTGGPMLPQRTGGMAPQPTGM |
1 | 3boiA | 0.15 | 0.15 | 4.99 | 1.77 | SPARKS-K | | CKGADGAHGVNGCPGTAGAAGSVGGP-GCDGGHGGNGGNGNPGCAGGVGGAGGASGGTGVGGRGGKGGSGTPKGADGAPGA |
2 | 5w3nA | 0.15 | 0.11 | 3.75 | 1.30 | MUSTER | | ------SYSGYSQSTDTSGYGQSSYSSYGQSQNTGYGTQSTPQGYG------STGGYGSSQSSQSSYGQQSSY-------- |
3 | 3j9aA | 0.09 | 0.09 | 3.26 | 2.26 | Neff-PPAS | | -DPVIQERLDHDYAHHPLVARMNTLDQGNMSQAEYLVQKRHYLVFLIAHHYYEAYLRRMGGIQRRDHLQTLRDQKP----- |
4 | 3bogA | 0.14 | 0.14 | 4.60 | 1.52 | SPARKS-K | | ADGAHGVGCPGTAGAAGS-----VGGPGCDGGHGGNGGNGNPGCAGGVGGAGGASGGTGVGGRGGKGGSGTPKGADGAPGA |
5 | 2ftcN | 0.12 | 0.11 | 3.96 | 0.52 | FFAS-3D | | -DAGKQGKVVQVIRQRNGLNTHYRYIGKTMDYRGTMIPSEAPLLHRQVKLVDPMDR-KPTEIEWRFTEAGERVRVSTRSG- |
6 | 5c5vA2 | 0.08 | 0.02 | 0.98 | 0.20 | HHpred | | -MMWNYGAFPQTWEST---E--VL------F-EAGVTG------------------------------------------- |
7 | 2mk0A | 0.21 | 0.20 | 6.28 | 1.25 | MUSTER | | SQPSDCGEVIEECPIDACFLPKSDSARPPDCTAVGRNVLPFPNNIGCPSCSPDNPMFTPSPDGSP--PNCSPTMLPSPS-- |
8 | 6cg0B | 0.24 | 0.05 | 1.54 | 0.36 | CNFpred | | ----------------------------------------------------------------FFFGQKGWPKRSCPTGV |
9 | 1jchB | 0.08 | 0.02 | 0.99 | 0.48 | HHsearch-2 | | LQPYFNH---QIDISDNEYFSFD--------------------------------------------YRDGDW-------- |
10 | 2v6lZ | 0.03 | 0.02 | 1.62 | 2.10 | Neff-PPAS | | -SVTVPNDDWTLSSLSETFDDGTQTLQGELTLALDKLAKNPSNPQLLAEYQ---SKLSEYTLYRNAQSNTVKVIKDVDAAI |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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