Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | QGHRYLIQQAAAQCDWLHLFLVKEDSSRFPYEDRLDLVLKGTADIPHLTVHRGSEYIISRATFPCYFIKEQSVINHCYTEIDLKIFRQYLAPALGVTHRFVGTEPFCRVTAQYNQDMRYWLETPTISAPPIELVEIERLRYQEMPISASRVRQLLAKNDLTAIAPLVPAVTLHYL |
1 | 5h16A | 0.14 | 0.11 | 3.71 | 1.20 | SPARKS-K | | NGHVDLVTRASRMFDEVVVAIAIGHNPLFSLEERVALAQSSLGHLSNVEFVGFDGLL------------------------------VNFFKEQKATAVLRGLR-----AVSDFEYEFQLANMNRQLDPHFEAVFLTPSEQYS-FISSTLIREIARLKG--DVTKFVPQAVVEAF |
2 | 1o6bA | 0.19 | 0.14 | 4.62 | 1.83 | FFAS-3D | | -GHLDIIKRGAHIFEQVYVCVLNNKKPLFSVEERCELLREVTKDIPNITVETSQG------------------------------LLIDYARRKNAKAILRGLRAVSDFEYEQGTSVNRVLDESI---------ETFFANNQYSFLSSSIVKEVARYDG--SVSEFVPPEVELAL |
3 | 4wsoA | 0.17 | 0.16 | 5.25 | 1.71 | HHpred | | DGHLALARRFADVLTELVLMPAGQPKQVSAAEHRLAMTRAAAGSGVAVSVATDE---I-EHAGPTYTVETLELLIGADQLVRLDTWRD-WRRLFDFAHVCAATRPGFDFAAASPAVIASVLRA----TPAGRLLIDTTLA---LDVAATDIRAH-LRACIARSAEHVSPAVWAYI |
4 | 1od6A | 0.20 | 0.15 | 4.94 | 1.43 | MUSTER | | NGHLDVIQRASRLFEKVTVAVLEN-QYLFSAEERLAIIREATAHLANVEAATFSGL------------------------------LVDFVRRVGAQAIVKGLRAVS--DYEYELQMAHLNRQLY---PGLETLFILAAT-RYSFVSSTMVKEIARYGG--DVSKLVPPATLRAL |
5 | 5o06A | 0.19 | 0.15 | 4.79 | 1.24 | CNFpred | | LGHLDVFERAAAQFDEVIVAVLINKAGMFTVDERIEMIRESTADLPNLRVESGQGLLV------------------------------DFVRERGLNAIVKGLRT--GTDFEYELQMAQMNKH----IAGVDTFFVATAP-AYSFVSSSLAKEVATYGG--DVSALLPASVHQRL |
6 | 1k4kA | 0.17 | 0.15 | 5.07 | 1.10 | HHsearch-2 | | YGHLKPVETLANLITRVTIIPNNVPRPEANSVQRKHMLELAIADKPLFTLDEREL----KRNAPSYTAQTLKFIIGQDSLLTFPTWYETILDNA--H-LIVCRRPGYPLEMAYQQWLEDHLHL----QPAGKIYLAETPW---FNISATIIRERLQNG--ESCEDLLPEPVLTYI |
7 | 1vlhB | 0.18 | 0.14 | 4.64 | 1.54 | Neff-PPAS | | LGHVDIIKRALSIFDELVVLVTENKKCMFTLEERKKLIEEVLSDLDGVKVDVHHGL------------------------------LVDYLKKHGIKVLVRGLRAVT--DYEYELQMALANKKLY---SDLETVFLIASE-KFSFISSSLVKEVALYGG--DVTEWVPPEVARAL |
8 | 1k4kA | 0.17 | 0.15 | 5.07 | 1.76 | HHsearch | | YGHLKPVETLANLITRVTIIPNNVPRPEANSVQRKHMLELAIADKPLFTLDEREL----KRNAPSYTAQTLKFIIGQDSLLTFPTWYETILDNA--H-LIVCRRPGYPLEMAYQQWLEDHLHL----QPAGKIYLAETPW---FNISATIIRERLQNG--ESCEDLLPEPVLTY- |
9 | 1qjca | 0.18 | 0.14 | 4.64 | 1.38 | PROSPECTOR2 | | NGHIDIVTRATQMFDHVILAIAASPKPMFTLEERVALAQQATAHLGNVEVVGFSDL------------------------------MANFARNQHATVLIRGLRAVADFEYEMQLAHMNRHL-----MPELESVFLMPSKEW-SFISSSLVKEVARHQG--DVTHFLPENVHQAL |
10 | 1kqoA | 0.14 | 0.12 | 4.13 | 1.26 | SAM | | NMHLRLFELAKDYMNGVIISPVGDAKGLIPAYHRVIMAELATKNSKWVEVDTWES----LQKEWKETLKVLRLLCGADLLESFALWKSQIVANY--G-LICVTRAGNDAQKFYE---SDVLWK-----HRSNIHVVNEIA---NDISSTKIRRALRRG--QSIRYLVPDLVQEYI |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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