Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240 260
| | | | | | | | | | | | | |
| Seq | NLQEDMSRTNAELERSQNLNAQLENDLANLQAEGQNAFPSGASVAGTYTTRIAPSIAPGRRGGRTSPTSSIISGFNPRDSGSEPMGGGSGILPMITAQRDRFKKRNAQLETELSEVHRTVSQLRQEIAALQKDNLQLYEKTRYVSTYNRGGPSSLSSSPAAVSSASAYAPNPNPSTVSIGSGGGNQGGIGLDRYRQAYESNISPFAAFRGRESARAYKRMSIPERAVYSVTRMVLASRTSRNLFAAYCVALHLLVFLSLYWLGS |
1 | 6el1O | 0.08 | 0.08 | 3.11 | 1.01 | SPARKS-K | | VLQEKALRVSLYSQRLDVIVRESLSSLQVKLENTLAL--TYFTTLEEIDEALISQD--------IDEESKSEMRKERINIIKNLSNDITQLKQLFIEKTELLDKSSSDLDKVLQAEQLRQKQLTEDIATKELERKEIEKKRDKIIEALDVIREHNLVDAFKDLIPTGENDLAKPEIELEITKKLLGQFSEGLKYIDLTDARKNQIDTASTRLTELNRQLEQSEKLIAGVNAVIKIDQEKSAVVVEAEKLSRAWHIFIHEITALQ |
2 | 5nenA1 | 0.10 | 0.06 | 2.11 | 1.04 | FFAS-3D | | QAQAQVDSLRDQYYTTLATEGRLLAER------------------------------------------------DGLSIVTFSVKDKPRVAEIIALQTQLFASRRQALQSEIDGYKQSMDGIRFQLKGLQDSRGNKQIQLSSLR-------------------------------------------EQMNSMKQLAADGYLPRNRYLEVQRQEVNSSIDETVGRIGQLQKQLLESQQRIDQR-------------------- |
3 | 5nnvA | 0.08 | 0.07 | 2.79 | 1.16 | MUSTER | | AESSAISAKEAKIEDTRDKIQALDESVDELQQVLLVTSEELEKLEGRKEVLKERKKNAVQNQEQLEE-----------------------AIVQFQQKETVLKEELSKQEAVFETLQAEVKQLRAQVKEKQQLSNELTELKIAAAKKEQACKGEEDNLARLKKELTETELALKEAKEDLSFLTSESS---STSGEEKLEEAAKHKLNDKTKTIELIALRRDQRIKLQHGLDTYERELKEKRLYKQKTTLL-------------- |
4 | 5nnvA | 0.06 | 0.05 | 2.30 | 1.62 | Neff-PPAS | | -AKEEELAESSAISAKEAKIEDTRDKIQALDESVDELQQVLLVTSEELEKLEGRKEVLKER--KKNAVQNQEQLEEAIVQFQQKETVLKEELSKQEAVFETLQAEVKQLRAQVKEKQQLSNELTELKIAAAKKEQACKGEEDNLARLKKELTETELALKEAKEDLSFLTSESSSTSGEEKLEEAAKHKLNDKTKTIELIALRRDQRIKLQHGLDTYERELKEKRLYKQKTTLL------------------------------- |
5 | 6ek4A | 0.09 | 0.09 | 3.31 | 0.90 | SPARKS-K | | IIQEKTLRISLYSRDLDEAARASVPQLQTVLRQLPPQ------------DYFLTLTEIDTELEDPELDDETRNTLLEARSERNLKKDVKGVIRSLRKEANLMASRIADVSSSLKEEQERKAEIQADIAQQEKNKAKLVVDRNKIIESQDRQYNLADMFKDYIPNISDLDKLDLANKKELGNISKGLKYIELADARAKLDERINDDLKIQLKGVEQRIAGIEDVHQIDKERTTLLLQAAKLEQAWNIFAKQLQNTIDGKIDQQDL |
6 | 2tmaA1 | 0.13 | 0.07 | 2.36 | 0.99 | FFAS-3D | | NALDRAEQAEADKKAAEDRSKQLEDELVSLQKK----------------------------------------------------------LKGTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQ-------------------------------------------ERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQL----KEAKHI--------------------- |
7 | 6f1tX2 | 0.15 | 0.06 | 1.90 | 0.65 | HHpred | | QHIIRLESLQAEIKMLSDRKRELEHRLSATLEEND----------------------------------------------------------LLQGTVEELQDRVLILERQGHDKDLQLHQSQLELQEVRLSYRQLQGGGGGGGGGGGGGGGGG------------------------------------------------------------------------------------------------------------- |
8 | 4cgkA1 | 0.12 | 0.09 | 3.23 | 1.02 | MUSTER | | EAQKQVDQIQEQVSAIQAEQSNLQAENDRLQAESKKLEGEITELSKNIVSRNQSLEKQARSAQTNGAVTSYINTIVNSKSITEAISRVA-AMSEIVSANNKMLEQQKADKKAISEKQVANNDAINTVIANQQKLADDAQALTTKQAELKAAELSLAAEKATAEGEKASLLE---------------QKAAAEAEARAAAVAEAAYKEKRASQQQSVLASANT------------------------------------------ |
9 | 5gheA | 0.07 | 0.05 | 2.02 | 0.76 | CNFpred | | DFKARCGILIKEAKQYEEAAKNIVTSLDQFLHGDQKKLE------------------------------------------------------GVINIQKRLKEVQTALNQAHGESSPAHKELLEKVKNLKTTLERTIKAEQDLEKKVEY----------------SFLLGPLLGFVVYEILEN----TAVQHIKNQIDEIK--------KQLDSAQHDLDRDVKIIGMLNSINTDIDNLYSQGQEAIKVFQKLQGIWATIGAQ |
10 | 6f1tX2 | 0.16 | 0.08 | 2.53 | 0.59 | HHsearch-2 | | QHIIRLESLQAEIKMLSDRKRELEHRLSATLEEND----------------------------------------------------------LLQGTVEELQDRVLILERQGHDKDLQLHQSQLELQEVRLSYRQLQGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG----------------------------------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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