Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | MRIQLLLVSTLVASIVATRVEDMATFRTEKQWQQDLQYRREFVKRQLAPKPKSNIVVSHTVSCVIDGGNMTSVWRFEGQFNPHIASEVILHDTSGLYNVPHEVQNDGQVLTVTVKRSAPADIAKVLISLKPVQLSSGQYECRPQLQLPWVPRPSSFMYDSYRLWYEKRWLTIILYVFMWTYLVTLLQYCIVRFIGTRLFYFLQRNITIRFTGKP |
1 | 4hg6A | 0.09 | 0.09 | 3.36 | 0.75 | SPARKS-K | | YRPLLFTFLLCLSGVLATLVRWVAFPGDRSVLLVVGGWAVLNVLLVGKQQRRAAPRVQMEVPAEAQNRSLTATVLDAS----TSGVRLLVRLP--GVGDPHPALEAGGLIQFQPKFPDAPQLER-MVRGRIRSARREGGT--VMVGVIFEAGPIAVRETVAYLIFGEMREATLLHGMARILWMAAASLPKTARDFMDEPARRRRRHLLAFGTDF |
2 | 6b3yA | 0.17 | 0.14 | 4.60 | 0.67 | FFAS-3D | | -RVQESIIHRLFDALTFGHEKDPETFRDYTCWKET----EAEAQEVSLPLDKNECVYKLSSSVKTNRGVGKIAMTQKRLF-------LLTEGRPGYVEI----ATFRNIEEVKNSTVAFLLLRIPTLKIKT-VAKKEVFEANLKSEC-----------DLWHLMVKEMWAGKQLYVQQALTNVLLMDAVVAIHAASKLAYFDN----------- |
3 | 5y00A | 0.12 | 0.07 | 2.32 | 0.29 | HHpred | | ----------------------------------VVIA-SPL-FHMFAHYPEDSYTLDRHHEYSLEDGCVTSKTTLNAGFDPKGAEVKITPHGPNGIRSTVYLKEDGTIQIGTIVTPVGGRVTQPKAHFLHTQIIQHIVTELAVAGNLWHGMDEL----------------------------------------------------------- |
4 | 3l9oA | 0.10 | 0.10 | 3.65 | 0.72 | MUSTER | | VPVMEKKLAELKKDFDGIEVEDEENVKEYHEIEQAIKGYREDVRQVVHPANALSFLQPGRLVEISVNGKDNYGWGAVVDFAKVYTDHESYIVNVVVNTMYIDSPVNLLKPFNPTLPEGIRPAEESICAVIPITLDSIKSIGNLRLYMPKDIRASGQKETVGKSLREVNRRFPDGIPVLDPVKNMKIEDEDFLKLMKKIDVLNTKLSSNPLTNSM |
5 | 4ktpA | 0.07 | 0.05 | 1.94 | 0.73 | CNFpred | | -------------------------------------------------------AVLMKYTVESDDTDAVLDTGIDYDVWSDHLQGHHYFSHPTGDGVTAKTVSYEDTVTVVETCSLDADGSGRTFPLSLEA--GKPVTLEKAMIIYSSNDVDNPQDEALLEAK-EEEKAANEWDNLWSHYDVTINIIDQVALRFNIYHAIIA---------- |
6 | 1im3H | 0.12 | 0.05 | 1.81 | 0.54 | HHsearch-2 | | ----------------------------------------------------PWFQIE-DNRCYIDNGKLFARGSIVGNMSRFVFDPKADYGGVGELYADDVEPGESLKWNVRN-LDVMPIFETLALRLVLQG-DVIWLRCVPEL--------------------------------------------------------------------- |
7 | 5zkpA | 0.05 | 0.05 | 2.38 | 0.68 | Neff-PPAS | | --LIILFCNLVIIRTLLMQAKALIVYGSTTGNTEYTAETIARELADAGYEVDSRDAASVEAGGLFEGFDLVLLGCSTWGDDSIELQDDFIPLFDSLEETGAQGRKVACFGCGDSYFCGAVDAIEEKLKNLGAEIVQDGLRIDGDPRAARDDIVGWAHDVRGAIAEVKRRDLWMACTVLAVFIICFVPHHVVQLPWTLAELGFQDSKFHQAINDA |
8 | 1im3H | 0.14 | 0.06 | 2.06 | 0.45 | HHsearch | | ----------------------------------------------------PWFQI-EDNRCYIDNGKLFARGSIVGNMSRFVFDPKADYGGVGELYVDDVVPGESLKWNVRN-LDVMPIFETLALRLVLQG-DVIWLRCVPEL--------------------------------------------------------------------- |
9 | 3l9oA | 0.09 | 0.09 | 3.51 | 0.62 | SP3 | | MEKKLAELKKDFDGIEVEDEENVKEY--HEIEQAIKGYREDVRQVVTHPANALSFLQPGRLVEISVNGKDNYGWGAVVDFAAVYTDHESYIVNVVVNTMYIDSPVNLLKPFNPTLPEGIRPAEESICAVIPITLDSIKSIGNLRLYMPKDIRASGQKETVGKSLREVNRRFPDGIPVLDPVKNMKIEDEDFLKLMKKIDVLNTKLSSNPLTNSM |
10 | 3kl1A | 0.12 | 0.08 | 2.99 | 0.76 | PROSPECTOR2 | | L-------------------------------TDEEQKTLEPVIKTYHQFEPDPTTCTSLITQRIHKHFVKRCRLISGDGDVGSVREVTVISGLPASTSTERLEFDHRVLSFRVVGGHRLKNYKSVTSVNEFLNDSGKVYTVVLESYTVDIPEGNTEEDTKMFVDT-----------------------VVKLNLQKLGVAATS-------APM |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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