Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | KLDSQRMVSERGLPALRSLFDNVRFRGKGHEAEDLRLLMHKMENWAHRLYPKLQFEDFVDRVEKLGSKKDVQTCLKRIRLDM |
1 | 5cwcA1 | 0.10 | 0.10 | 3.60 | 0.75 | SPARKS-K | | --SEKEELRERLVKICVENAKRKGDDT-EEAREAAREAFELVREAAERAGIDSSIKECVENAQREGYDEACRAAAEAFKRVA |
2 | 1m8xA2 | 0.10 | 0.09 | 3.15 | 0.64 | FFAS-3D | | ---FALSTHPYGCRVIQRILEHCL-------PDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIR--- |
3 | 5n9qA | 0.12 | 0.10 | 3.44 | 0.27 | HHpred | | -------KSPMPFPTLFAAISHK------VAENDMLLINADYQQLRDK---KMTRAEFVRKLRVIVGDDLLRSTITTLQNQP |
4 | 6ei9A2 | 0.18 | 0.16 | 5.16 | 0.77 | MUSTER | | PLPLAEVK--RLLCAHVREL--HDFYG---PAKGYRIARKHVSWYLQEHAPNDQFRRTFNAIEDA---SEQLEALEAYFENF |
5 | 1hu3A | 0.16 | 0.15 | 4.88 | 0.45 | CNFpred | | ELFKLKMLTEAIMHDCVVKLLKN------HDEESLECLCRLLTTIGKDLDFKPRMDQYFNQMEKIVTSSRIRFMLQDVIDLR |
6 | 1vt4I3 | 0.09 | 0.09 | 3.29 | 0.50 | HHsearch-2 | | TFDSDDLIPPYLDQYFYSHIHHFLFLAWNA-SGSILNTLQQLKFYKPYICDNDLVNAILDFLPKIEENLICSKYTDLLRIAL |
7 | 2f33A1 | 0.16 | 0.15 | 4.87 | 0.64 | Neff-PPAS | | --ESHLQSSLITASQFFEIWLHFDADGSGYEGKELQNLIQELLQARKKAGLELEMKTFVDQYGQRDGIVELAHVLPT----- |
8 | 5dckA | 0.21 | 0.10 | 3.11 | 0.38 | HHsearch | | ------------------------------------------HMVQLRQGAKEDYSSFIDRLFAQQNTAEVKLYLKQSLPE- |
9 | 1o1eK1 | 0.13 | 0.11 | 3.80 | 0.72 | SP3 | | -------FDETEIEDFKEAFTVIDQNADGIDKDDLRETFAAMG------RLNVKNEELDAMIKEASGPTVFLTMFGEKLKGA |
10 | 1nyaA1 | 0.06 | 0.06 | 2.65 | 0.47 | PROSPECTOR2 | | TTAIASRWDFDGEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGVGSFIRVTENLIFEQGEASFNRVLGPVVKGC |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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