Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280
| | | | | | | | | | | | | | |
| Seq | AYDFEYSDMGPHPEEIDEWFVYQFWQWVRLNSAQRAFEWHWQHEFNAQNAWDDADNDTRTRFIQAAIAGVQSNDAALRSASIGKLVYLVLGRWGDTAMTNATSGDNKSVASISQLQAIKAGVECLTSLEGLPVIWETLRNSFELHWSGDPQGQHGNLQEAQDELMNLMTIMYIAIQETLNDPEDMSSTYGKLLELNPSLVDYMLTATSKLRWDEQNLMPHTQIFLLFWKSILLVFGGSQELAAVKKATSETANDGKDRETITASPLDYHVFRQEITSKYPAYVPPQPLIPLEAE |
1 | 3qmlC | 0.11 | 0.09 | 3.30 | 1.08 | FFAS-3D | | -YEFS-SDFKEMRNIIDSNPTLSSQDIARLEDSFDRIMEFAH------------DYKHGYKIITHEFALLENLPLTLRELSTRVI--------TSCLRNNPPVVEFINESFPNFKSKIMAALSNLNDSRSSNILIKRYLSILNEL--PVTSEDLYSTVVLQNVYQLQIKVLELISKILKADMYELQEWANEFQEIDELHTRTFFDTLYNLKKIFKSDITINKGFL---NWL------AQQCKARQSNLDNGLQERD---------TEQDSFDKKLIDRHLIF------------ |
2 | 4r0zA3 | 0.10 | 0.05 | 1.77 | 1.07 | SP3 | | -----------------------------------------------------TNEENLTQLIIKLLEIIRVANDGMTACACGTLSNLTCNN--------------------------TRNKQTVCSHGGIDALVTAIRRL------------PEVEEVTEPALCALRHCT--------ARHSLAEEAQSELRFCQ--AFPVILDQLET---LRTP---VIKAALGVIRNSALL-------QTNLIELTQEQTANGH------------------------------------- |
3 | 5k7vA | 0.11 | 0.09 | 3.30 | 0.77 | SPARKS-K | | -----------------IEEVVAEMIDILAESSKKSIEELARAADNKTT------EKAVAEAIEEIARLATAASEEFMARAISAIAELAKKAIEAIYRLADNHTTDTFMAIAAIANLAVTAILAIAALAAISAIAELAKKAIEAIYRLADNHTTDFMAAAIEAIALLATLAILAIALLASNHTTE-EFMAKAISAIAELAKKAIEAIYRLADNSPTYIAIEAIEKIARKAIKAIEMYKEKAKSAIDEIREKAKEAIKRLEDNRT------------------------------ |
4 | 3dadA2 | 0.06 | 0.04 | 1.77 | 1.02 | FFAS-3D | | ------------------------------PELRRSLFS-LKQIFQEDKDLVP--EFVHSEGLSCLIRVGAAADHNYQSYILRALGQL--------------------MLFVDGMLGVVAHSDTI------QWLYTLCAS------------------LSRLVVKTALKLLLVFVEYSENNAPLFIRAVNSVASTTGA--PPWANLVSILEEKNGADPELLVYTVTLINKTLAALPDQDSFYDMEALVQRHLGTAGTDVDLR---TQLVLYENALKLE---------------- |
5 | 4gmnA | 0.10 | 0.07 | 2.50 | 0.40 | HHpred | | -----------ILPVLKDLKSPDAKSR--TTAAG-AI----ANIVQD-AK--CRKLLLREQVVHIVLETLTDNNIDSRAAGWEILKVLAQEEAD--------------------------FCVHLYRLDVLTAIEHAAKAVLETLTTSEPPFSKLLKAQQRLVWDITGSLLVLIGLLALARDE----IHEAV--ATKQILRLLFRLISAD---I---APQDIYEEAISCLTTLSEDNLKVGQAITDDLATGTDP---------------------------------------- |
6 | 5ugqA | 0.11 | 0.10 | 3.60 | 0.75 | MUSTER | | PAIWCNSDADNDRLRAEPQVDYSREGVAHIENETKQFVGRCVDKG--KNFLAHVGTVNVAKDLDAIRAALGDDKL---YGTRIGSAYAEE---DGAVDPNADPIEAELRQAKGFQDAFNNYAADCAKNAGCPKAVEVYHSLVDPLVDPDNPRISRPARTKDPRGLSYSDAIVGTIAL--YSPNLWQHLTDGLSELVDNRGDTLLALADYRRDSHGRYNNSGDARVAINCVDQPPVTDRDKVIDEDRRAREIAPFSYGKFTGDAPLGTCAFW---------PVPPTSQPHAVSAP |
7 | 4c0pA | 0.08 | 0.06 | 2.40 | 0.84 | CNFpred | | -----------IVERCCRCLRFAVRCV-LLQPLVTQMVNVYHVHQ-----------SCFLYLGSILVDEYG-GCRQGLLDMLQALCIPTFQLLEQQNGLQN-----HPDTVDDLFRLATRFIVTLLRSQVVIPILQWAIASTTLD--------------HRDANCSVMRFLRDLIHTGVANDEDFELRKELIGQVMNQLGQQLVSQLLHTCCFCLPPYTLPDVAEVLWEIMQVD------RPTFCRWLENSL---------TVTHKQLTDFHKQVTSA---------------- |
8 | 1vt4I | 0.15 | 0.14 | 4.61 | 0.72 | HHsearch-2 | | DVQDMPKSILSK-EEIDHIIMSKVSGTLRLFWVQKFVEEVLRINYQQPSMMTRMYIEQRDRLYRQALLELRPNSPETVLEMLQKLLYQIDPNWTSRSDH--------SSNIKLRIHSIQAELRRLLKSKPNAKAWNAFNLSCKILLTTRFSLDHHSMTLTPDEVKS----LLLKYLDCRPQDLPRESIRDNWKHVNCDKLTTIIESSKMFRLSPSAHIPT---ILL----SLIWFDVIKSDVMVVVNKLHKYSLEKQPKESTIIPSIYLELKVKLENEYATFDSDDLIPPYLDQ |
9 | 1qgkA3 | 0.10 | 0.09 | 3.25 | 0.92 | Neff-PPAS | | ---------DVVMASLLRMFQSTAGSGGVQEDALMAVSTLVEVLG-------GEFLKYMEAFKPFLGIGLKNAEYQVCLAAVGLVGDLCRALQSNIIPFCDENENVHRSVKPQILSVFGDIALAIGGEKYLEVVLNTLQQASQAQVDKSD---YDMVDYLNELRESCLEAYTGIVQGLKGDQENVHPDVMLVQP----RVEFILSFIDHIAGDEDHTDGVVACAAGLIGDLCTAFGKVEARPMIHELLTEGRR-SKTNKAKTLARWATKELRKLKNQA---------------- |
10 | 4gmnA1 | 0.11 | 0.05 | 1.82 | 0.58 | HHsearch | | ---------DK-ILPVLKDLKSDAKSR--TTAAG-A----IANIVQ-DAKCR--KLLLREQVVHIVLETLTDNNIDSRAAGWEILKVLAQEEAD--------------------------FCVHLYRLDVLTAIEHAAKAVLETLTTSEPPFSKLLKAQQRLVWDSLLVLIGLLALA--------------------------------------------------------------------------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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