>PF07914 (406 residues) LFKNGDGLFNTHVYLEDLQEVIRDQMKTNAQLGPGTKYTIVGDGNGFMSRVVLVDPDWTV SDENLPKRFVLKITSCMHVLNVLDQMNLPDKRESALWSIFEYEAQGLHNREVNLYEIFGK WDIDNLLLSPKVYFSKKFDSENQTKGFFGMEFVENAITRHLYINLKPYELHAVLKALAIF QAEGLKLNKEEQESVTGYDLEKIVGKMFSVSGLKGIFDQAREINPEELSETANRVEAFGL ELVNFDMVKNLNTYLGIKKDVLVHGDLWSANIMWTEKEDGELKVNKIIDYQSIQLGNPSQ DLVRLFTSTLSGSDRRAYWEKLVEQFYEYFLEAVKDKNVPYTLEQLKESYRFYFVTGSLL MLPMLGPIAKVKLAEMTDPKEIEECRNILTEKAEIILEDMEHWHLM |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | LFKNGDGLFNTHVYLEDLQEVIRDQMKTNAQLGPGTKYTIVGDGNGFMSRVVLVDPDWTVSDENLPKRFVLKITSCMHVLNVLDQMNLPDKRESALWSIFEYEAQGLHNREVNLYEIFGKWDIDNLLLSPKVYFSKKFDSENQTKGFFGMEFVENAITRHLYINLKPYELHAVLKALAIFQAEGLKLNKEEQESVTGYDLEKIVGKMFSVSGLKGIFDQAREINPEELSETANRVEAFGLELVNFDMVKNLNTYLGIKKDVLVHGDLWSANIMWTEKEDGELKVNKIIDYQSIQLGNPSQDLVRLFTSTLSGSDRRAYWEKLVEQFYEYFLEAVKDKNVPYTLEQLKESYRFYFVTGSLLMLPMLGPIAKVKLAEMTDPKEIEECRNILTEKAEIILEDMEHWHLM | |||||||||||||||||||
1 | 2pulA | 0.14 | 0.12 | 4.01 | 1.46 | SPARKS-K | -----KTPLYETLNESSAVALAVKL-------GLTLTCQEIGDGNL--NYVFHIYDR----------ALIIKQAVP-------YAKVESWPLT-----------IDRARIESSALIRQGEHV---PHLVPRVFYSDT------EMAVTVMEDLSHLKIARIEGENYPHLSQHIGEFLGKTLFYSSDYAKQLVKQFTNPELCDITERLVFTDPFEELRPFVEKLWNDSVKIEAAKLKKSFLTS----------------AETLIHGDLHTGSIFASEHE------TKVIDPEFAFYGPIGFDVGQFIANLFDREPLYEHVNQVWETFEETFSEAWQKDNIDGYLTDTLSHIFEEAIGFAGCELIRRTIGLAADLDTIVPFDKRIGRKRLALETGTAFIEKITDVIEL | |||||||||||||
2 | 3atsA | 0.09 | 0.08 | 2.87 | 2.44 | FFAS-3D | --------------PAVISRWLSSVLPGGAAPEVTVESGVD--STGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYR--------------------LDHQFEVIRLVGE---LTDVPVPRVRWIET-TGDVLGTPFFLMDYVEGVVPPDWFADAPAERQRQLQDATVAALATLHSIPNAQNT--------FSFLTDTTLHRHFNWVRSWYDFAVEGIGPLLERTFEWLQSHWPDDAAA--------REPVLLWGDARVGNVLYRDF-----QPVAVLDWEMVALGPRELDVAWMIFAHRVFQELAGLEDDVRATYQALT-------GVELG------DLHWFYVYSGVMWACVFMRTGARRVHF-GEIEKPDDVESLFYHA--GLMKHLLGEH-- | |||||||||||||
3 | 2pulA | 0.16 | 0.13 | 4.41 | 2.00 | HHpred | --KTPL---YETLNESSAVALAVKL-GL------TLTCQEI--GDGNLNYVFHIYD---------R-ALIIKQAVPYAKV---ESW---PLT------------IDRARIESSALIRQGEHV---PHLVPRVFYSD------TEMAVTVMEDLSHLKARKGEGENYPHLSQHIGEFLGKTLFYSSDYALEPVKQFTNPELCDITERLVFT---DPFFDHTNDFE-EELRPFVEKLKIEAAKLK-----KSF---LT-SAETLIHGDLHTGSIFASEHE------TKVIDPEFAFYGPIGFDVGQFIANLRDREPLYEHVNQVWETFEETFSEAWQDSLDVYAIDGYLTDTEEAIGFAGCELIRTIGLAHVADLDIVPFDKR-IGRKRLALETGTAFIEKRSEF--- | |||||||||||||
4 | 2pulA | 0.14 | 0.12 | 3.97 | 1.44 | MUSTER | LYET--------LNESSAVALAVKL--------LTLTCQEI--GDGNLNYVFHIY-----------RALIIKQAVP------YAKVESWPLT------------IDRARIESSALIRQGEHVPH---LVPRVFYSDT------EMAVTVMEDLSHLKIARKGGENYPHLSQHIGEFLGKTLFYSSDYAKVKKQLVKQFTNPELCDITERLVFTDPFFDHDTNDFEEELRPFVEKLWNNDSVKIEAAKLKKSFLTS---AETLIHGDLHTGSIFASEH------ETKVIDPEFAFYGPIGFDVGQFIANLFDREPLYEHVNQVWETFEETFSEAWQKDSLDYLTDTLSHIFEEAIGFAGCELIRRTIGLAVADLDTIVPFDKRIGRKRLALETGTAFIEKITDVIEL | |||||||||||||
5 | 2olcA | 0.16 | 0.13 | 4.19 | 1.43 | CNFpred | ------------LNESSAVALAVKLG--------TLTCQEIGD--GNLNYVFHIYD----------RALIIKQAVPY-------------------------LTIDRARIESSALIRQGEHV---PHLVPRVFYSDT------EMAVTVMEDLSHLKARKGLIENYPHLSQHIGEFLGKTLFYSSDYALEP-------KVKKQLVKQFTNPELCDITERLVFTDNDFEEELRPFVEKLWNNDSVKIEAAKLKKSFLTSAETLIHGDLHTGSIFASE------HETKVIDPEFAFYGPIGFDVGQFIANLF-REPLYEHVNQVWETFEETFSEAWQKDS-GYLTDTLSHIFEEAIGFAGCELIRRTIGLAVADLDTIVPFDKRIGRKRLALETGTAFIEKRSEFKTI | |||||||||||||
6 | 2pulA | 0.15 | 0.13 | 4.22 | 0.95 | HHsearch-2 | --KTPLY---ETLNESSAVALAVKL-GL------TLTCQ--EIGDGNLNYVFHIYD---------R-ALIIKQAVPYAKV---ESW-------P---L-----TIDRARIESSALIRQGEHV---PHLVPRVFYSD------TEMAVTVMEDLSHLKARKGIEENYPHLSQHIGEFLGKTLFYSSDYALEPKKQLKQFT-NPELCDI-TERLFDPFFDHTNDFEE-ELRPFVEKVKIEAAKLKK-----SFL---T-SAETLIHGDLHTGSIFASEHE------TKVIDPEFAFYGPIGFDVGQFIANLRDREPLYEHVNQVWETFEETFSEAWQDSLDVYAIDGYLTDTEEAIGFAGCELIRTIG-LAHVALDIVPFDKR-IGRKRLALETGTAFIEKRSEFKTI | |||||||||||||
7 | 2pulA | 0.14 | 0.12 | 3.97 | 1.98 | Neff-PPAS | ---------YETLNESSAVALAVKLGL---------TLTCQEIGDGNLNYVFHIYD----------RALIIKQAVPYAKVESWPLT------------------IDRARIESSALIRQGEHVPH---LVPRVFYSDT------EMAVTVMEDLSHLKIARKGGENYPHLSQHIGEFLGKTLFYSSDYPKVKKQLVKQFTNPELCDITERLVFTDPFFDHDTNDFEEELRPFVEKLWNNDSVKIEAAKLKKSFLTSA---ETLIHGDLHTGSIFASEH------ETKVIDPEFAFYGPIGFDVGQFIANLFDREPLYEHVNQVWETFEETFSEAWQKNIDGYLTDTLSHIFEEAIGFAGCELIRRTIGLAHADLDTIVPFDKRIGRKRLALETGTAFIEKRSEFKTI | |||||||||||||
8 | 3atsA | 0.14 | 0.11 | 3.72 | 1.22 | HHsearch | ------------TLPAVISRWLSSVLPGGA----APEVTVEGVSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVF--------------------PTYRLDHQFEVIRLVGELT---DVPVPRVRWIETTGD-VLGTPFFLMDYVEGVVPPDVFGDAPAERQRATVAALATLHSIPNAQNT--FSFLT-DTT---LHRHF--NWVRSWYDFAVEIGSPLL-------ERTFEWLQS-----HWPDDAA-REPVLLWGDARVGNVLYR-D--F--QPVAVLDWEMVALGPRELDVAWMIFAHRVFQELAMREDDVRATYQALTGV----ELGDLHWFYVYSGVMWACVFMRT-----GARRVHFGIEKPDDVE--SLFYHAGLMKHL---LGEEH---- | |||||||||||||
9 | 2olcA | 0.15 | 0.12 | 4.09 | 2.00 | PROSPECTOR2 | KTPL-----YETLNESSAVALAVK---------LGLTLTCQEIGDGNLNYVFHIY----------DRALIIKQAVPY-----------------------WPLTIDRARIESSALIRQGEHVPH---LVPRVFYSD------TEMAVTVMEDLSHLKIARKGGENYPHLSQHIGEFLGKTLFYSSDYALEPKV-------KKQLVKQFTNPELCDITERLDHDTNDFEEELRPFVEKLWNNDSVKIEAAKLKKSFLTSAETLIHGDLHTGSIFASEHE------TKVIDPEFAFYGPIGFDVGQFIANLFDREPLYEHVNQVWETFEETFSEAWDSLDVYANIDGYLTDTLSHIFEEAIGFAGCELIRRTADLDTIVPFDKRIGRKRLALETGTAFIEELFKLLVK | |||||||||||||
10 | 2pulA | 0.17 | 0.11 | 3.48 | 2.04 | SAM | ----------ETLNESSAVALAVKL-G---------TLTCQEIGDGNLNYVFHIY------------ALIIKQAVPYAKV-SWPLT------------------IDRARIESSALIRQGEHV---PHLVPRVFYS------DTEMAVTVMEDLSHLIARKGLGENYPHLSQHIGEFLGKTLFYSSDYALEPKKQFTNPELCDITERLVFTDPFFDH--DTNDFE-EELRPFVEKLKIEAAKLK------KSF---T-SAETLIHGDLHTGSIFASEHE------TKVIDPEFAFYGPIGFDVGQFIANLFLREPLYEHVNQVWETFEETFSE-------------------------------------------------------------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |