Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | GGLSSYILPAAAVGAMGYCYMWWKGLSLSDVMFVTKRNMANAVQSMSKQLEQVSSALAATKRHLTQRLENLDGKMDEQVEVSKTIRNEVNDVKDDLSQIGFDIEAIQQMVAGLEGKIELLENKQ |
1 | 3na7A1 | 0.10 | 0.09 | 3.31 | 0.90 | SPARKS-K | | ----------LEPLIREKRKDLDKALNDKEAKNKAILNLEEEKLALKLQVSKNEQTLQDTNAKIASIQKKMSEELRSLNIEEDIAKERSNQANREIENLQNEIKRKSEKQEDLKKEMLELEKLA |
2 | 5xg2A | 0.11 | 0.10 | 3.49 | 1.05 | FFAS-3D | | --------KERLKAEILTGEARLPG------LRERAENLRRLVEEKRAEISELERRLSSISFELRIKLSDLEKELELARKDLEKVLAEERAVREEIEVAKRRINELDTLIERERGELAKLRGR- |
3 | 2qa7C | 0.16 | 0.11 | 3.77 | 0.42 | HHpred | | ---------------------------------HLIERLYREISGLKAQLENMKTESQRVVLQLKGHVSELEADLAEQQHLRQQAADDCEFLRAELDELRRDTEKAQRSLSEIERKAQANEQR- |
4 | 3na7A1 | 0.11 | 0.10 | 3.76 | 1.00 | MUSTER | | RE-KDLDKALNDKEAKNKAILNLEE-EKLALK-LQVSKNEQTLQDTNAKIASIQKKMSEIKSE--RELRSLNIEEDIAKERSNQANREIENLQNEIKRKSEKQEDLKKEMLELEKLALEL---- |
5 | 5jtgA | 0.10 | 0.09 | 3.27 | 0.63 | CNFpred | | --KRADYLLYSLIDALVDDYFVL------------LEKIDDEIDVLEEEVLEREKETVQRTHQLKRNLVELRKTIWPLREVLSSLY-IEKETVPYFRKVYDHTIQIADTVETFRDIVSGLLDVY |
6 | 6gapA | 0.12 | 0.10 | 3.72 | 0.56 | HHsearch-2 | | -GLESRVSALEHSDTILRITQ-------------GLDDANKRIIALEQSRDDLVASVSDAQTQLGARVGQLETGLAELRVDHDNLVARVDTAERNIGSLTTELSTLTLRVTSFESRISTLERTA |
7 | 4wheA | 0.10 | 0.10 | 3.56 | 0.87 | Neff-PPAS | | ------PQKLVRLMIQEMEDTLVEVRSTSARALAEKKQLTRRIEQASAREVEWQEKAELALLKREDLARAALIEKQKLTDLIKSLEHEVTLVDDTLARMKKEIGELENKLSETRARQQALMLR- |
8 | 2xzrA | 0.11 | 0.09 | 3.19 | 0.77 | HHsearch | | -----------------------KQ-IEDKIILSKIYHIENEIARIKKLIGAIDGRVTRNTQKNSKAIAANTRTLQQHSARLDSQQRQINENHKEMKQIEDKIEEILSKIYHIENEIARIKKL- |
9 | 2yfaA1 | 0.10 | 0.09 | 3.26 | 0.72 | SP3 | | --------DSSAIRADQAMDALSQEVMARPEADSVRLAQYQLISKARQQLLQVRIDVRGYIAENSANEQAALRQLDAALADTDNLKRQLPSEDARLQQFENAVLAYRDAVRQFRD--------- |
10 | 2yfaA2 | 0.07 | 0.06 | 2.73 | 0.76 | PROSPECTOR2 | | GSHMGDI--GQLNKDLTDLRIARLQYMIANGDDTAAANTLAKLDAFSKQQAYLATENVKLLGELGDTISAYKLSLNKMRQGYDATRAARVSMVANITTSRAEMTVQGADIVKRSDALYQIQLER |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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