Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | RTYFYDQLEERMELYGFNASGCMERLICEVSELPLHEHNGVFGDVLSVIFRPSSSVREALPVSYYEAESRGSIEGCQQYRAFC |
1 | 5cwcA1 | 0.17 | 0.17 | 5.55 | 0.81 | SPARKS-K | | RERLVKICVENAKRKGDDAAREAFELVREAAERAGIDSSEVLELAIRLIKEVENAQREGYDEACRAAAEAFKRVAEAAKRAGI |
2 | 4bopA | 0.09 | 0.08 | 3.17 | 0.55 | FFAS-3D | | KLALYEKQDKYLRQRNKDGN-CLYRAVSKTVYGDQSLHRELREQTVHYIADHLDHFSPLIEGDVGEFIIAAAQDG-------- |
3 | 2knjA | 0.14 | 0.10 | 3.29 | 0.28 | HHpred | | -PETNAAFDNAVQQLNCLNRACAYRKMCATN--NL-------EQAMSVYFTNEQ------IKEIHDAATACDP---------- |
4 | 5ztcA | 0.14 | 0.13 | 4.54 | 0.66 | MUSTER | | KSTEIDYYRAKLRDSDLRPDLVLSSLLFGVKE--LYDTDEAYQFWLRYGFYPPKHLYEVVQADITENVLQMEHE-FTDLFSNW |
5 | 4c0pA | 0.12 | 0.11 | 3.82 | 0.59 | CNFpred | | NNKLLALLFEVLQQD-SNLHEAASDCVCSALYAIENTNLPLAMQLFQGVLT--------LETAYHMAVAREDLDKVLNYCRIF |
6 | 2knjA | 0.14 | 0.11 | 3.69 | 0.34 | HHsearch-2 | | SPETNAAFDNAVQQLNCLNRACAYRKMCATN--NL-------EQAMSVYFTNEQ------IKEIHDAATA-----CDPEAHHE |
7 | 5cwlA2 | 0.09 | 0.08 | 3.25 | 0.70 | Neff-PPAS | | LEVVARVAIEAARRGNTDAVREALEVALEIARESG--TEEAVRLALEVVKRVSDEAKKQGNEDAVKEAEEVRKKIEEESGGWL |
8 | 2knjA | 0.15 | 0.11 | 3.67 | 0.44 | HHsearch | | SPETNAAFDNAVQQLNCLNRACAYRKMCATN--NL-------EQAMSVYFTNEQI------KEIHDAATA-----CDPEAHH- |
9 | 4yxxA3 | 0.14 | 0.12 | 4.08 | 0.74 | SP3 | | VEEAVKRALKLKTKLGVS--LEQALKILEVAAKLGTTVEEAVKRALKLKTKLGVSLEQAL-KILKVAAELGT----------- |
10 | 2ip6A | 0.07 | 0.06 | 2.51 | 0.40 | PROSPECTOR2 | | ELDLFTRLQFLLQKHDTIEPYQYVLDILETGISKTKHNQQVYNKIASQALVDKLHFTAEENKVLAAINELAHS---------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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