Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| Seq | LTGVPVLFIPGNAGSYKQVRSLGSVALKKAQHLRTPFHFNYFSVDLNEELTGMFGAILSEQTEFVHRCVLKILTMYRKAETPPKSVVLVGHSVGGIIARALFTLPDFDLSMVNTIITQATPHQSPVINADQYMADFYRTVNQYWQDGMSSGRLSHVTIASTGGAHRDYLVQSGLTSLKRIVPESNAVSAVTSAIPKVWLSTDHLAIVWCKQLVLATKRALFD |
1 | 4fblA | 0.10 | 0.09 | 3.32 | 1.12 | SPARKS-K | | GSRIGVLVSHGFTGSPQSMRFLAEGFARA--------GYTVATPRLTGTPAEMAASTASDWTADIVAAMRWLEERCD-------VLFMTGLSMGGALTVWAAGQF---PERFAGIMPINAALRMESPDLAALAVPAIKHLITIGAVAEMLLPRVKCPALIIQSR-EDHVVPHNGELIYNGIGSTEKELLWLE-------NSYHVATLDKELILERSLAFIRK |
2 | 3lp5A | 0.16 | 0.14 | 4.82 | 1.78 | FFAS-3D | | -RMAPVIMVPGSSASQNRFDSLITELGKETPKKHSVLKLTVIVIGFANNRDG--KANIDKQAVWLNTAFKALV-----KTYHFNHFYALGHSNGGLIWTLFLERYESPKVHIDRLMTIASPYNMESTSTTA-KTSMFKELYRYRTG-----LPESLTVYSIAGYTSDGTVPYNSVNYGKYIFQDQVKHFTEITVTGA--NTAHSDLPQNKQIVSLIRQYLLA |
3 | 3lp5A | 0.17 | 0.15 | 5.06 | 2.28 | HHpred | | TRMAPVIMVPGSSASQNRFDSLITELGKEPKKIAANDNEPFIVIGFANNRDGK--ANIDKQAVWLNTAFKALVKTYH-----FNHFYALGHSNGGLIWTLFLERYLSPKVHIDRLMTIASPYNMESTSTT-AKTSMFKELYRYRTG-----LPESLTVYSIAGTTSDGTVPYNSVNYGKYFQDQKHFTEIT--VTG--ANTAHSDLPQNKQIVSLIRQYLLA |
4 | 3lp5A | 0.16 | 0.14 | 4.82 | 1.30 | MUSTER | | TRMAPVIMVPGSSASQNRFDSLITELGKET---PKKHSVLKLTVQTDGANNRDGKANIDKQAVWLNTAFKALVKT-----YHFNHFYALGHSNGGLIWTLFLERYESPKVHIDRLMTIASPYNMESTSTTAK-TSMFKELYRYRTGLP-----ESLTVYSIAGYTSDGTVPYNSVNYGKYIFQDQVKHFTEITVTG--ANTAHSDLPQNKQIVSLIRQYLLA |
5 | 4k6hA | 0.14 | 0.13 | 4.31 | 1.24 | CNFpred | | SVSKPILLVPGTGTTGPQSFNWIPLSTQL--------GYTPCWISPPPFMLN----DTQVNTEYMVNAITALYAGSG-----NNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYKGTVVSAPSVWQQTTSALTTALRNAGG--LTQIVPTTNLYSA-TDEIVQPQVSLDSSYLF--NGKNVQAQAVCGPLFVIDHAGSLTSQFSYVVGRSALRS |
6 | 1lbtA | 0.13 | 0.12 | 4.07 | 0.46 | HHsearch-2 | | SVSKPILLVPGTGTTGQSFDNWIPLSTQ--------LGYTPCWISPPPFML----NDTQVNTEYMVNAITALYAGS-----GNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYKGTVLAGPLDAPSVWQQTGSALTTALRGGLTQIVPTTNLY-SATDEIVQPQVSNPSSYLFNGKNVQAQA-VC-GPLFVIDHAGSLTSQFSYVVGRSALRS |
7 | 3lp5A | 0.16 | 0.15 | 4.93 | 1.33 | Neff-PPAS | | -RMAPVIMVPGSSASQNRFDSLITELGKETPKKHDNEPFIVIGFANNRD----GKANIDKQAVWLNTAFKALVKTY-----HFNHFYALGHSNGGLIWTLFLERKESPKVHIDRLMTIASPYNMES-TSTTAKTSMFKELYRYRTGL-----PESLTVYSIAGTENYTTVPYNSVNYGKYIFQDQVKHFTEITVTG--ANTAHSDLPQNKQIVSLIRQYLLA |
8 | 1i6wB | 0.18 | 0.14 | 4.41 | 0.67 | HHsearch | | -EHNPVVMVHGIGGASFNFAGIKSYLVSQ--------GWSRYAVDFWDK-----TGTNYNNGPVLSRFVQKVLDET-----GAKKVDIVAHSMGGANTLYYIKNLDG-GNKVANVVTLGGANRLTTGK---------------ALPGT--DPNQKILYTSIY-SSADMIVMNYLSR----LDG-ARNVQI--------HGVGHIGLLYSSQVNSLIKEGLN- |
9 | 3lp5A | 0.14 | 0.13 | 4.48 | 1.49 | PROSPECTOR2 | | TRMAPVIMVPGSSASQNRFDSLITELGKETPKKHQTDGTIKYSGSIAANDNENNRDGKANIDKQAVWLNTAFKALV--KTYHFNHFYALGHSNGGLIWTLFLERYESPKVHIDRLMTIASPYNMESTSTTAK-TSMFKELYRYRTGLP-----ESLTVYSIANYTSDGTVPYNSVNYGKYIFQDQVKHFTEITVTG--ANTAHSDLPQNKQIVSLIRQYLLA |
10 | 1lbtA | 0.15 | 0.13 | 4.23 | 1.60 | SAM | | -VSKPILLVPGTGTTGQSFDNWIPLSTQL--------GYTPCWISPPP-----FMNDTQVNTEYMVNAITALYAGS-----GNNKLPVLTWSQGGLVAQWGLTFF---PSKVDRLMAFAPDYKGTVLA----PSVWQQTTGSALTTALRGGLTQIVPTTNLY-SATDEIVQPQVSNSSSYLFNGKNVQAQ---------AIDHAGSLTSQFSYVVGRSAL-- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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