Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | YAECYPGMEEADDAIADSDDEVDYTKMDMGNKKGPVGRWDFDTQEEYSDYMANKEALPKAAFQYGVKMADGRKTRRAGPKDEKAELDREWQKIQNIIQKRKKMGEEGDSR |
1 | 1w9rA | 0.15 | 0.15 | 4.89 | 0.81 | SPARKS-K | | SHMPEKKVAEAEKKVEAKKKAEDQKEEDRRNYPTNTYKTL---ELEIAESDVEVKKAELELVKEEAK-EPRNEEKVKQAKAEVESKKAEATRLEKIKTDRKKAEEEAKRK |
2 | 1s35A1 | 0.09 | 0.07 | 2.74 | 0.50 | FFAS-3D | | -------LSITQKAVASEDMPESLPEAEQLLQQ------HAGIKDEIDGHQDSYQRVKESGEKV---IQGQTDPEYLLLGQRLEGLDTGWDALGRMWESRS--------- |
3 | 3iukA1 | 0.11 | 0.07 | 2.65 | 0.27 | HHpred | | --------------------AADLNNIASPDIRAIFDL-PTDTVEHWEHIAGRAANVPGAIEGYIASLRAAKDDRKVA---AARQIRIVIEQTGRYAAE----------- |
4 | 1w9rA | 0.13 | 0.13 | 4.42 | 0.84 | MUSTER | | -GSHMPEVAEAEKKVEEAKKKAEDQKEED-RRNYPTNTYKTLELEIAESDVEVKKAELELVKEEAKEPRNEEKVKQAKAEESKKAEATRLEKIKTDRKKAEEEAKRKAAE |
5 | 1hciA | 0.13 | 0.07 | 2.54 | 0.52 | CNFpred | | -------------------------------------------ESDLAAHQDRVEQIAAIAQELN----ELDYHDAVNVNDRCQKICDQWDRLGTLTQKRREALERMEKL |
6 | 2pffB | 0.16 | 0.15 | 4.85 | 0.57 | HHsearch-2 | | GATGHSQGLVTAVAIAETDSWESFSEDSLENNEGSISNLTQEQVQDYVN---KTNSHLPAGKQVEISLVNGAKNLVVS--GP----PQSLYGLNLTLRKAKAPSGLDQSR |
7 | 1w9rA | 0.10 | 0.10 | 3.69 | 0.95 | Neff-PPAS | | -HMPEKKVAEAEKKVEEAKKKAEDQKEEDRRNYPTNTYKTLELEIAESDVEVKKAELELVKEEAKEPRNEEKVKQAKAEVESKKAEATRLEKIKTDRKKAEEEAKRKAAE |
8 | 2jngA | 0.12 | 0.06 | 2.24 | 0.49 | HHsearch | | ------------------------------------MRSEFASGNTYALYVR-------DTLQPGMRVRMLDDYEEISRQSNNGVVQVFWESTG---------RTGFEE- |
9 | 1ij5A2 | 0.11 | 0.09 | 3.31 | 0.66 | SP3 | | RKE----FREHFVRLGFDKKSVQFRYADE-DESDDV------GFSEYVHLGLCLLVL-RILYAFADFDKSGQLSKEEEDAHIPESARKKFEHQFSVVD----VDDSKSSY |
10 | 1w9rA | 0.09 | 0.09 | 3.45 | 0.62 | PROSPECTOR2 | | GSHMPEKKVAEAEKKVEEAKKKAEDQKEEDRRNYPTNTYKTLELEIAESDVEVKKAELELVKEEAKEPRNEEKVKQAKAEVESKKAETRLEKIKTDRKKAEEEAKRKAAE |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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