Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | RYLLWREWDLDKSKLVFVMLNPSKADADIDDPTLRRCINFTKSWGYGSLRVVNLFAYRSASPLDLKKVDDPIGKQNDRYLKKAIKSADQVVVAWGNNGKLMQRDRFVLELLSKLNIQPHCLGITKAGYPRHPL |
1 | 2l82A | 0.17 | 0.14 | 4.47 | 0.84 | SPARKS-K | | -----------MSQIFVVFSS--------DPEILKEIVREIKRQGV---RVVLLYSDRRERLEEFEKQGVDVREDFRENIREIWERLDVVVIVTTDD---KEWIKDFIEEAKERGVEVFVVYNNKDDDRRKEA |
2 | 4r81A | 0.11 | 0.09 | 3.29 | 0.66 | FFAS-3D | | ----------ASMHVYILFAHPSRKS--FSREVLEAFTEGLSEAG-HTYEVGDLYRMNFRSLREISQEAGSPLPEDVMEEHERIGRADALAFIWSD---CPAKLKGWFDRVTRIDIEKAVVLCSAGHTE---- |
3 | 2dp6A | 0.12 | 0.11 | 3.72 | 0.29 | HHpred | | ----EPYWGDPEARILLFGLAPGAHGPFTGDASGAFLYPLLHEAGLYGVYLTAAVRCAPPK--NKPT-PE-ELRACARWTEVELGLEVRVYVALGRIALE-----ALLAHFGLRHGAHYPLP---GGRSYHVS |
4 | 6gq0A1 | 0.16 | 0.12 | 4.02 | 0.62 | MUSTER | | ---------KEAYHFVLVP--EELDNDYWR-LVEKGAKAAAKELGV-DLEYI--------------GPRQANIDEHLRILKKAAAAVDGIITQ----GLTEAEFVPVINEITDKNIPVVTIDTDAPTSRRVAY |
5 | 3lcfA | 0.13 | 0.10 | 3.40 | 0.72 | CNFpred | | -------------GVMAALLTPFDQQQALDKASLRRLVQFNIQQGIDGLYVGGTGEAFVQSLSEREQ--------VLEIVAEEAKGKIKLIAHVGC--VSTAESQQLAASAKRYGFDAVSAVTP--------- |
6 | 5h93A | 0.19 | 0.17 | 5.56 | 0.47 | HHsearch-2 | | AYLSR--FGSPPKEVLFVGMNPGPWGMFGSEVSGRRLWGFIRRFGFARFFVANYCPLLFLTADKLRGEQEPLFAACDLALRRTVVLRPRVVIGVGAFAEA-----RCHEALEGFD--VEVG------RIIHPS |
7 | 1y80A | 0.10 | 0.08 | 2.78 | 0.67 | Neff-PPAS | | ---------PSVGKIVLGTV-----KGDLHDIGKNLVAMMLESGGFTVYNLGVDIE-------------------PGKFVEAVKKYQPDIVGMSALLTTTMMNMKSTIDALIAAGLRVKVIVGGAPLSQDFAD |
8 | 2dp6A | 0.12 | 0.11 | 3.74 | 0.60 | HHsearch | | PYWARPVPGDPEARILLFGLAPGAHGPFTGDASGAFLYPLLHEAGLYGVYLTAAVRCAPPKNK----PTPEELRACARWTEVELGLEVRVYVALGRIAL-----EALLAHFGFRHGAHYPL--P-GGRHYHV- |
9 | 5hq4A2 | 0.15 | 0.13 | 4.30 | 0.85 | SP3 | | ----THTWGSGD-------------KHGATTKNTKYYMDFAAKYGFDGVLVEGWNTGWDGDWFFNGDVFSFTQPYDIAALTKYSKQTGVQLIGHGNVSNYRKQMADAFALYEKSNDGGNIKRIDKNGIAR--- |
10 | 3wydA | 0.18 | 0.18 | 5.85 | 0.62 | PROSPECTOR2 | | PYRLYVTYDGTKAFPLVIALMGGDENSYFDSYQRGAFMIEAENRGY---IVACPKGYVGPAERDVMDVIAEVRRDYYGTWSIAMNHPDLAPVAGGGNPLGMANIRVMVEAAKKHGTEIKYIEIPGGDHKRKRP |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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