Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| Seq | KSMEELRQSLIYTTLELEQTRAAVQDELRKRDDQLLNLKDLLSKTMRERDEAQEKCQRFLLEKLVFQQQQQQVAAAPVSGISSIEDEPRRGIDSNNGLSSSDCEESIVSSPVIDHLPQPQPQPQLPQVTQSMIELTPDKPLPEKGKLLQAVMKAGPLLQTLLLAGPLPQWRHPPPPLESFEIPPVTIPSPPPQPQLLHQDSFVNGSSTTTNCGRVSRKRVFSDGSGSPTETKYQRL |
1 | 3jc8Na | 0.08 | 0.06 | 2.39 | 1.01 | SPARKS-K | | VLFAVVLIGAGVANYLWYDDRQSELEAHQAGVASTKARIAELEKIIGEVKNINTRKAEVEKKLAVLDALRKGRSGPV-----RMMDALASATPKKVWVKTFSENNNAVSIDGSAVSHDGVVWTPKGMGRLVDRRRDSKTAR----------------------------------------------VEMLTSDATIEEFPEAQVSPFFKNIDLQTAKQVGGAQVGVPILVEFKIT |
2 | 2tmaA | 0.08 | 0.07 | 2.85 | 1.11 | Neff-PPAS | | --MDAIKKKMQ----MLKLDKENALDRAEQAEADKKAAEDRSKQLEDELVSLQKKLKGTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEK----------------MEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEEIKTVTNNLKSLEAQAEKY |
3 | 4dvyP1 | 0.09 | 0.07 | 2.76 | 0.88 | SPARKS-K | | ---QQFINNLQVAFIKVDNVVASFDDQKPIVDKNDRDNRQAFDGISQLREEYSNKAIKNQYFSDFIDKSNDLINKDNLIDVESSTKSFQKFGDQRYQIFTSWVSMQ------------KDPSKINTRSIRNFMENIIQPPIPDDKEKAEFLKSAKQSFAGIIIGNQIRTDQKFMGVFDESLKERQEAEKNGGPTGGDWLDIFLSFIF----------------------------- |
4 | 6j5tG3 | 0.13 | 0.11 | 3.66 | 0.73 | FFAS-3D | | -FLEKTLNILEEKGRQLEDLQSEMQSFLKDAENETLRVADLRELVYEAEDILVDRLQEINERITKIKSQVEPYFEFITPDSFSNPEGLNCRHLGISGNFDEKQIKVNHKLRGVVSTTKTGEVNKLN--SDLAKKFTDCKYLRVDAPLSEILDEIASLLACLSLSNQFPRSMEDLHNLQILDASYCQNLKQLQ-------------------------------------------- |
5 | 6h9xA | 0.16 | 0.13 | 4.35 | 0.33 | HHpred | | RALEERRKVLQVQTENLQAERNSRSKSIGQARLEVNKLGEQLDAAKSELETLLAEIRDIALA---IPNIP--HDDVPVGR----DENDNVEVSR-WGT-----------PRQFD-F-------EVRDHVTLGEMGLTGSRFGQLARLHRALAQHGPYLVTLYGTGQLPKFAG---DLFHTRPSNYALIPTAETNLVRDEIIDEDKMTAHTPCFRLIRMHQFD-------------- |
6 | 5cwpA | 0.13 | 0.12 | 4.14 | 0.90 | MUSTER | | SDEEEARELIERAKEAAERAQEAAERT-PRVRELARELKRLAQEAAEEVKRDPS--SSDVNEALKLIVEAIEAAVRALEAAERTGDPEVRELARELVRLAVEAAEEVQRNPSSSDVNEALKLIVEAEAAVRALEAAERTGDPE---VRELARELVRLAVEAAEE------RNPSSE-EVNEALKKIVKAIQEAVESLREAEESGDPEKREKARE--RVREAVERAEEVQRDPSGWL |
7 | 4tqlA | 0.11 | 0.06 | 2.16 | 0.53 | CNFpred | | ELLKRAKEEMKKVKDKMEKLLEKLKQIMQEAKQKMEKLLKQLKEEMKKMKEKMEKLLKEMKQRMEEVKKKMD-DELLEKIKKNIDDLKKIAEDLIKKAEENIKEA---------------------KIAEQLVKRA--------KQLIEKAKQVAELIKKIL-------------------------------------------------------------------------- |
8 | 5m88A | 0.25 | 0.06 | 1.97 | 0.57 | HHsearch-2 | | SLLKAFQDELVLETYTTREQLARVREELATALYQHDAAVRVIARLTRERDEAREALARL--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
9 | 5cwqA | 0.10 | 0.09 | 3.49 | 1.09 | Neff-PPAS | | ---EELERESEEAERRLQEARKRSEEARERGD--LKELAEALIEEARAVQELARVACERGNSEEAERASEKAQRVLEEARKVSEEAREQGDDEVLALALIAIALAVLALAEVACCRGNSEEAERASEKAQRVLEEARKEEAREQGDDEVLALALIAIALAVLALAEVACCRGNKEAERAYEDARRVEEEARKVKESAEEQGDSEVKRLAEEAEQLAREARRHVQECRGGWLEHHH- |
10 | 5gmkq1 | 0.15 | 0.10 | 3.41 | 0.74 | HHsearch | | LENFKLRSTLDSLTKKLSTV-------MYERDAAKL----VAAQLLMEKNEDSKDLPK--SSQ-----QMYGHN--EVNTEYFINRGTIGFYIVHSAKS-DVEYSSGVLHKDSLLLA-----LYSPDG-ILDVNLSSPDQ-----------------ASSR--FP------A---KIKE-----VKFADNG-------YWMVVEC--QTVVCFDLRKDVGTL---------AYPT- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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