Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | FDNYFLTFELRELDTQRCGMGKETIFPLSFKERMVYVTASSLRLSTNEYGHLASSLIILIITFIQIGFFIIIDYGLFWMLSMVTFHGQLRTENEVPSHIDLKVKGQGLLADMLRKLVGIFGPVTRKQMIVDTTNCLPRPLLPDYDRYEQIAFIFIICFFLAITESYGLRLRHVIAGMFFPERKKQRAVWLY |
1 | 5cwjA | 0.13 | 0.09 | 3.26 | 0.75 | SPARKS-K | | -DSEEEQERIRRILKEARKSG-----------------------TEESLRQAIEDVAQLAKEAIRVILRIAKESALRQAIRAVAEIAKE-------------AQDSEVLEEAIRVILRIAKESG------------------SEEALRQAIRAVAEIAKEARVLEEAIRVIRQIAEESGSEEARRQAERAE |
2 | 5hasA2 | 0.09 | 0.08 | 3.16 | 0.85 | FFAS-3D | | -----VGTVFERVKTRRANLGRLKALTLKDLEHRKSFDDSHMGDLDAEDEAYIRDAYLVFRSFCNLSQPMRSKLISLHLIHTLLNNHITVFTSPLCTIRNTKNNEPTNFLQAIKYYLCL--------------SITRNGASSVDRVFDICCEIFWLMLFKNEIEVFLNEIYLALLARRAPLSQKLTFVGI- |
3 | 3dinD | 0.13 | 0.03 | 1.08 | 0.28 | HHpred | | --------------------------------------------VIAEAKKISWPGVVLVILAVTSVYFFVLDFIFSGVVSAIFKALGI------------------------------------------------------------------------------------------------------ |
4 | 5h7cA3 | 0.09 | 0.08 | 3.18 | 0.74 | MUSTER | | -DSELVNEIVKQLAEVAKEATDKELV---IYIVKILAELAKQSTDSELVNEIVKQLAEVAKEATDKELVIYIVKILAELAKQSTDSELVNEIVKQLEEVAKEATDKELVEHIEKILEELEQQSAFYEILS-----LPNLNEEQRNAFIQSLKDDPSQSANLLAEAKSLNVNQAVKQL--AEKAKEA----- |
5 | 3rkoB | 0.10 | 0.08 | 2.91 | 0.75 | CNFpred | | -----NFREMVELAPAHFADGNNMLMWATLMLLGGAVGKSAQLPLQTWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMT-------------------PEVLHLVGIVGAVTLLLA-----------GFAALVQTDIKRVLAYSTMSQIGYMFLALGAWDAAIFHLMTHAFF-----KALLFLA |
6 | 2pffB | 0.12 | 0.12 | 4.09 | 1.25 | HHsearch-2 | | LEHVLLVPTASFFIASQLQEQFNKILPEPT-EGFAADDE---PTTPAELVGKFLGYNLCLIHALAAKLLQENDTTLVKTKELIKNYITARIDKKSAQLAIFGGQGNTFSAETLSELIRTLDAEKVFTQGLNILEWLENPSNTDKDYLLSIPISCPLIGVIAHYVVTAKLLTPGELRSYLKVRKAITVLFFI |
7 | 5cwmA | 0.10 | 0.10 | 3.65 | 0.69 | Neff-PPAS | | KRVEKLVKEAEELLRQAKEKGSEEDLEEAAREAKKVLEQAEKEGDPEVALRAVELVVRVAELLLRIAKESGSEEALERALRVAEEAARLAKRVLELAEKQGDPEVALRAVELVVRVAELLLRIAKESGS-------EEALERALRVAEEAARLAKRVLELAEKQGDPEVARRAVELVKRVAELLERIARES |
8 | 6itcE | 0.17 | 0.05 | 1.72 | 0.49 | HHsearch | | ---QRVTNFFK---E-------------VVRELKKVSW-----PNRKELVNYTA--VVLATVAFFTVFFAVIDLGISQLIRLVF----------------------------------------------------------------------------------------------------------- |
9 | 3ea5B | 0.08 | 0.07 | 2.94 | 0.68 | SP3 | | -------WTIINLVEQLAEATPSPIYNFYPALVDGLIGAANRIDNEFNARASAFSALTTMVEYATDTVAETSASISTFVMDKLGQTMSVDENQLTLEDAQSLQELQSNILTVLAAVIRKSPSSVEPVADMLMGRLLEKKDSAFIEDDVFYAISALAASLGKGFEKYLETFSPYLLKALVDSPVSITAVGFI |
10 | 5hamA | 0.16 | 0.16 | 5.22 | 0.73 | PROSPECTOR2 | | -DYWYTENEITHLLTAQLDEKKFSVQPLTEEMLKDYTAKANLIPDKEERALMLGDAKKREEILKLLRGGEAQQQINEDILNRATKDIKDNGKEKKDNQIILTFNSINYDGQKLPKLIDKTLGNLPNKPII---IDEQTKQQTDQSACGVFTVDNGIKIAEESKGEKGLRLREHHAQILTDAMFKQDAQWIQ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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