Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | NTDYLESAKKQFEYYKMLGDKTIDQLPDDKLFWQYNDESNSIAIIVKHLSGNMLSRWTDFLTSDGEKEWRHRDTEFDNDIKTKAELIQKWNDGWNCLFNALNSLQEEDFSKTIYIRNQGHSVTEAINRQLAHYPYHIGQMVFIGKMICNDKWISLSIPRG |
1 | 6iz2A | 0.12 | 0.11 | 3.76 | 1.72 | SPARKS-K | | LLLSPAELLAHWQGHRDLTRRVIEAFPEEGFAAHHAPDMRPFQAMACELAGMVEYQLDWFRRG-----------QPTWELPGRAELLAWWDKLTAELGAEVPQVSTEMWATPATTPFGKMSPLMSVMYLIDNEVHHRGQGYVYLRELGVT------PPAF |
2 | 6iz2A | 0.12 | 0.11 | 3.73 | 2.27 | FFAS-3D | | ----PAELLAHWQGHRDLTRRVIEAFPEEGFAAHHAPDMRPFQAMACELAGMVEYQLDWFRRGQPT-----------WELPGRAELLAWWDKLTAELGAEVPQVSTEMWATPATTPFGKMSPLMSVMYLIDNEVHHRGQGYVYLRELG------VTPPA- |
3 | 3gorA | 0.12 | 0.11 | 3.76 | 1.65 | HHpred | | NASRAKKWVQYFLSHRHVT-ELIHKIDEAHYDYKPTPTS-TAKQLATHL-FSFY-NFANTAK-HGDPSLF----RQKIE-EPETNLAKLAETYTEKTRQLIES-SDDDFDRTLDLFGTQ-STAQFLQLA-DHEIHHKGQLFVYVRG-GHTDLPLFVK--- |
4 | 6iz2A | 0.12 | 0.11 | 3.76 | 1.98 | MUSTER | | LLLSPAELLAHWQGHRDLTRRVIEAFPEEGFAAHHAPDMRPFQAMACELAGMVEYQLDWFRRGQ-----------PTWELPGRAELLAWWDKLTAELGAEVPQVSTEMWATPATTPFGKMSPLMSVMYLIDNEVHHRGQGYVYLRELG------VTPPAF |
5 | 1rxqA | 0.12 | 0.11 | 3.98 | 1.08 | CNFpred | | SKEQKDKWIQVLEEVPAKLKQAVEVMTDSQLDTPYRDGGWTVRQVVHHLADSHMNSYIRFKLSTPAIRPYDEKAWSESKTADPSGSLALLQELHGRWTALLRTLTDQQFKRGFYHPKEIITLENALGLYVWHSHHHIAHITELSRRMGWS---------- |
6 | 6iz2A | 0.13 | 0.11 | 3.93 | 1.39 | HHsearch-2 | | LLLSPAELLAHWQGHRDLTRRVIEAFPEEGAAHHAP-DMRPFQAMACELAGMVE-YQLDWFR-RGQPTW-------E-L-PGRAELLAWWDKLTAELGAEVPQVSTEMWATPATTPFGKMSPLMSVMYLIDNEVHHRGQGYVYLRELGVTPPAFY----- |
7 | 6iz2A | 0.12 | 0.11 | 3.76 | 2.20 | Neff-PPAS | | LLLSPAELLAHWQGHRDLTRRVIEAFPEEGFAAHHAPDMRPFQAMACELAGMVEYQLDWFRRG-----------QPTWELPGRAELLAWWDKLTAELGAEVPQVSTEMWATPATTPFGKMSPLMSVMYLIDNEVHHRGQGYVYLRELG------VTPPAF |
8 | 6iz2A | 0.13 | 0.11 | 3.93 | 2.19 | HHsearch | | LLLSPAELLAHWQGHRDLTRRVIEAFPEEGAAHHAP-DMRPFQAMACELAGMVE-YQLDWFR-RGQPTW-------E-L-PGRAELLAWWDKLTAELGAEVPQVSTEMWATPATTPFGKMSPLMSVMYLIDNEVHHRGQGYVYLRELGVTPPAFY----- |
9 | 5cogA | 0.09 | 0.08 | 3.12 | 1.42 | PROSPECTOR2 | | EYTSKKELKEEIEKKYEKYDAEFETISESQKDEKVETVDRTPSENLSYQLGWVNLLLEWEAKEIAGYNVETPAPGYKYGIYSIKEQRAKLREAVNEVYKWISTLSDDELFQAGNRKKAMWPVYKWIHNTVAPFTNFRGKIRKWKRLVP-----------E |
10 | 3cexA | 0.12 | 0.10 | 3.56 | 1.41 | SAM | | --KVTQLSSETLDRAHERFEETLAQTVA-EAN-TPAPLIKSVTWL-WHTARELDLQISALN--HSDPL--ALPEEAAK-VAEKQLLSDYLAASVALTKSYLDQIKEEQLSDVIDKNTPPVTRQVRLVSAIDDA-VHSGQAVYTRRLVI------------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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