Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40
| | |
| Seq | VWRSAITGITVDGALLEPIQYTVTAGNISIAPGVLNTDANHSIVISATSYQDTTVVQ |
1 | 6dkqA | 0.21 | 0.21 | 6.67 | 1.58 | SPARKS-K | | ALTQQITKVTVNGTVYKDLGWVSNMTGLHLGTKAF-KDGENTIVISSKGFEDVTITV |
2 | 6dkqA | 0.21 | 0.21 | 6.67 | 1.14 | HHpred | | ALTQQITKVTVNGTVYKDLGWVSNMTGLHLGTKAFK-DGENTIVISSKGFEDVTITV |
3 | 6dkqA | 0.21 | 0.21 | 6.67 | 1.43 | MUSTER | | ALTQQITKVTVNGTVYKDLIWVSNMTGLHLGTKAF-KDGENTIVISSKGFEDVTITV |
4 | 6dkqA | 0.20 | 0.19 | 6.19 | 1.75 | HHsearch-2 | | ALTQQITKVTVNGTVYKDLGWVSNMTGLHLGTKAFKD-GENTIVISSKGFEDVTITV |
5 | 6dkqA | 0.21 | 0.21 | 6.67 | 1.53 | Neff-PPAS | | ALTQQITKVTVNGTVYDTNGWVSNMTGLHLGTKAF-KDGENTIVISSKGFEDVTITV |
6 | 6dkqA | 0.20 | 0.19 | 6.18 | 2.57 | HHsearch | | ALTQQITKVTVNGTVYKDLGWVSNMTGLHLGTKAFKD-GENTIVISSKGFEDVTIT- |
7 | 5e0cA2 | 0.18 | 0.18 | 5.74 | 1.01 | SPARKS-K | | LHGNELTGLQVDGDSLAGEDYELAGDVLTMKADLMTPGELAVITAQFNSGADWHFQL |
8 | 3bwsA1 | 0.11 | 0.11 | 3.84 | 1.01 | SPARKS-K | | IHPYKGTVIRLGEEILPFKVLEMDKNIALVEAIPVYKDEEIELKLSSPGFQNSSYRI |
9 | 1o75B2 | 0.07 | 0.07 | 2.89 | 1.00 | SPARKS-K | | PKYEGNIDIGLKGKVLTIGGATLMDAAVDVFADDFTPGTEYTVEVRFKEFGSVRAKV |
10 | 6dkqA | 0.20 | 0.19 | 6.16 | 0.74 | FFAS-3D | | -LTQQITKVTVNGTVYKDLGWVSNMTGLHLGTKAFKD-GENTIVISSKGFEDVTIT- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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