Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | AVGQALGKEGSMQPGDVYKVSLPRSDLQVTVGGVAVKPALALGSWVAFKKMGDTAMVMGDLVLTEDEVTPVMTKLQEGGVMQTALHNHVLHESPRVMYMHINATGDAVKIAKAIHDALS |
1 | 1vr8A | 0.10 | 0.09 | 3.38 | 0.83 | SPARKS-K | | HHHHPPEAYSLDTAIFVLETRDYRLSDVKEIDSYDVEK----GKVAVFETEYGPVFLYVYKG---EEAKKIWKKLNGRGKKIVAWWRKN-------WLFIVEGKNGVEEFVKHVYRVYE |
2 | 5af2A | 0.11 | 0.08 | 2.73 | 0.44 | FFAS-3D | | -------------ADPNYFIGIQFRNIP------------------YKYDVKIPHLTFGVLHISDNMVPDVIDILKIMKMDITTSYTYMLSDG-----IYVANVSGVLSTYFKIYNVF- |
3 | 3gmgA | 0.15 | 0.09 | 3.12 | 0.30 | HHpred | | -------------------------------------------ILVGAVGATGITIDDPGPGVAPEVMIDVINELRAAGAEAIQINDVRVGVDTWVVGVSILAIGDPPTLAAAMNIP-- |
4 | 2qybA | 0.14 | 0.13 | 4.61 | 0.79 | MUSTER | | IIDDLLNLLLKEFKLDLAVIRLVDEKGVLRVRSYSGKGIAGIAGKDWEPEIETEAFLSNRLQFVND--KPLTRELQKEGIKSFAHIPISRKGEPPFGILSVFSRTILESLAGQLAQAVK |
5 | 6fyeA | 0.10 | 0.07 | 2.47 | 0.75 | CNFpred | | ---------------------------------------FGVVTAFEFDLHRVGPVRFASTYYSLDEGPQVIRAWRD-ELTWALYLRLAPP-GKPVICAMSCWIGDPHEGERQLESILH |
6 | 2qmwA2 | 0.06 | 0.03 | 1.50 | 0.32 | HHsearch-2 | | -----------------------------------------------FDQ--NATSLFLITPDKPGLLASVLNTFALFNINLSWIESRPLKTQLYRFFVQADSAITIKKVIAILETLDF |
7 | 2l82A | 0.12 | 0.12 | 4.18 | 0.68 | Neff-PPAS | | EILKEIVREIKRQGVRVVLLYSDQDEQGVDVRTVEDKEDFRENIREIWERYPQLDVVVIVTTDDKEWIKDFIEEAKERGVEVFVVYNNEAQQEFRSDGVDVRTVSDKEELIEQVRRFVR |
8 | 2qmwA2 | 0.06 | 0.03 | 1.49 | 0.40 | HHsearch | | -----------------------------------------------FD--QNATSLFLITPDKPGLLASVLNTFALFNINLSWIESRPLKTQLYRFFVQADSAITIKKVIAILETLD- |
9 | 5haaA1 | 0.13 | 0.13 | 4.36 | 0.68 | SP3 | | LIKHQIDSERALKAGETLEIT---KDITIEF--INTQHSIIDTVFVAIHTPSGAVVYACDFKFDRTPTFDRLKELGKEGVIALITEGHAYREKPEHVIPAHGTIQMHSEYIQMAEDAYS |
10 | 3keoA2 | 0.09 | 0.08 | 3.25 | 0.51 | PROSPECTOR2 | | TTRALLHYRFHDRNKMQISMAFDLDSNDL--VGKTTEDGIPVYGISTINDHLDSDIETAILTVPSTEAQEVADILVKAGIKGILSFSPVHLTLPKDIIVQYVDLTSELQTLLYFMNQQR |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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