Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | ILRSINKSVLRKKVLFYLYSIYPNYDYLANISRRVRSDPTNVLGCLKGMGNRYNGSSSLIELGLVEVVEKDGYKYYRITDLGRKVVEYV |
1 | 4esfA | 0.20 | 0.18 | 5.78 | 1.83 | SPARKS-K | | ---NLTEMLKGSLEGCVLEIISRRETYGYEITRHLNDLGFTEV----VEGTVYTILVRLEKKKLVNIEKKPPRKFYSLNEAGRQELELF |
2 | 4esfA | 0.24 | 0.21 | 6.66 | 1.33 | FFAS-3D | | -LTEMLKGSLEGCVLEIISR---RETYGYEITRHLNDLGFTEVVE----GTVYTILVRLEKKKLVNIEKKPPRKFYSLNEAGRQELEL- |
3 | 3f8fA | 0.19 | 0.18 | 5.79 | 1.00 | HHpred | | IPKEMLRAQTNVILLNVLK---QGDNYVYGIIKQVKEAS---NGEMENEATLYTIFKRLEKDGIISSYWGGRRKYYRLTEIGHENMRLA |
4 | 2co5B | 0.15 | 0.13 | 4.56 | 1.82 | MUSTER | | IRKYMRINYYIILKVLVING---SRLEKKRLRSEILKR----FDIDISDGVLYPLIDSLIDDKILREEEAPDGKVLFLTEKGMKEFEEL |
5 | 2qvoA | 0.21 | 0.18 | 5.72 | 1.19 | CNFpred | | --IKLLFKEKALEILMTIYYESLNDVYIQYIASKVNSPH----------SYVWLIIKKFEEAKMVECELEGRTKIIRLTDKGQKIAQQI |
6 | 1yg2A | 0.23 | 0.18 | 5.65 | 0.49 | HHsearch-2 | | --------SLPHVILTVLST---RDATGYDITKEFSASI---GYFWKSHQQVYRELNKMGEQGLVTCVLE----VYSITQAGRSALGEW |
7 | 2co5B | 0.15 | 0.13 | 4.56 | 1.59 | Neff-PPAS | | IRKYMRINYYIILKVLVING---SRLEKKRLRSEILKRFDIDI----SDGVLYPLIDSLIDDKILREEEAPDGKVLFLTEKGMKEFEEL |
8 | 6do0A | 0.19 | 0.17 | 5.45 | 0.74 | HHsearch | | -PKEMLRAQTNVILLNVLK---QGDNYVYGIIKQVKEAS---NGEMENEATLYTIFDRLEQDGIISSYWG-RRKYYRLTEIGHENCRL- |
9 | 4esfA | 0.23 | 0.21 | 6.69 | 0.89 | PROSPECTOR2 | | NLTEMLKGSLEGCVLEIISR---RETYGYEITRHLNDLGFTEV----VEGTVYTILVRLEKKKLVNIEKKPPRKFYSLNEAGRQELELF |
10 | 2dqlA | 0.11 | 0.09 | 3.26 | 0.90 | SAM | | --TYLCQEVAICYILYVLLQ---GESYGTELIQQLELSD----------TVLYSAIKFLEDNRAITGYLERPRRMYQVSPEWQHQAEDL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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