Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | LLSSPKWSSDKVNGGIKRKQDDVYVELIATAEDIEKKTAEAIRKQRELQNLIDSLENTDSQTILSMVYIDKMTRWQVIDELNCSESTYFRLLRVATKELN |
1 | 3hyiA2 | 0.15 | 0.13 | 4.35 | 1.42 | SPARKS-K | | ---------------VIGDVNRTVNFIEANAIRTANSTARQIRAIELIKENLENLP-EDLRRVALVRLRKELSLRELGKKLNLTKSQIYSKLKRIIKIAE |
2 | 3vdoA2 | 0.19 | 0.11 | 3.54 | 1.03 | FFAS-3D | | -----------------------------------------GDERRRVTECLKALT-DTQRQCIELAYYGGLTYVEVSRRLAANLSTIKSRMRDALRSL- |
3 | 3hyiA2 | 0.15 | 0.13 | 4.37 | 1.39 | MUSTER | | -----------VIGDVNRTVNFIEANAIRTANSTARQIRAIELIKENMG--LENLP-EDLRRVALVRLRKELSLRELGKKLNLTKSQIYSKLKRIIKIAE |
4 | 2o8xA | 0.17 | 0.10 | 3.30 | 1.17 | Neff-PPAS | | ---------------------------------------MGFEDLVEVTTMIADLT-TDQREALLLTQLLGLSYADAAAVCGCPVGTIRSRVARARDALL |
5 | 3hugA | 0.16 | 0.11 | 3.67 | 1.22 | SPARKS-K | | -----------------------------DPEQSTPDEVNAALDRLLIADALAQLS-AEHRAVIQRSYYRGWSTAQIATDLGIAEGTVKSRLHYAVRALR |
6 | 3vdoA | 0.16 | 0.15 | 4.96 | 1.03 | FFAS-3D | | ------WRNASEFDSAKGSALAWLLTMA-HRRAVDRVRCEAGDERRRVTECLKALT-DTQRQCIELAYYGGLTYVEVSRRLAANLSTIKSRMRDALRSL- |
7 | 3vdoA | 0.17 | 0.15 | 4.95 | 0.83 | HHpred | | --NASEFDSA-------KGSALAWLLTMAHRRAVDRVRCEAGDERRRVTECLKALT-DTQRQCIELAYYGGLTYVEVSRRLAANLSTIKSRMRDALRSLR |
8 | 2o8xA | 0.17 | 0.10 | 3.30 | 1.34 | MUSTER | | ---------------------------------------MGFEDLVEVTTMIADLT-TDQREALLLTQLLGLSYADAAAVCGCPVGTIRSRVARARDALL |
9 | 1rp3A | 0.11 | 0.09 | 3.22 | 0.64 | CNFpred | | -------------------LEEVFRDFARDY-TNVEEEVIKRELTEKVKEAVSKLP-EREKLVIQLIFYEELPAKEVAKILETSVSRVSQLKAKALERLR |
10 | 3hugA | 0.14 | 0.10 | 3.40 | 0.59 | HHsearch-2 | | --------------DPEQSTPDEVNAA---------------LDRLLIADALAQLSAE-HRAVIQRSYYRGWSTAQIATDLGIAEGTVKSRLHYAVRALR |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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