Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | MVWHGLLAKAATTVVTGAVGVAAYDGLRKAVAKAPIREAAVTTTAWALRGARKAEESAESARLKVADVMAEARERIGEEVPPPAVAD |
1 | 5cwlA2 | 0.15 | 0.14 | 4.67 | 0.91 | SPARKS-K | | KLALEVVARVAIEAARTDAVREALEVALEIARESGTEEAVRLALEVVKRVSDEAKKQNEDAVKEAEEVRKKIEEESGGWLEH----- |
2 | 4dylA2 | 0.20 | 0.18 | 5.89 | 0.77 | FFAS-3D | | LQLNELTVESVQHTLTSVT-----DELAVATEMVFRRQEMVTQLQQELRNEEEKRQVLQEALQGLQELLQTKLEHLGPGEPPPVL-- |
3 | 6fkfp | 0.12 | 0.10 | 3.63 | 0.28 | HHpred | | FNLT-LPIIM---AEFLFLMFALDKIYYTPLG-DFM-DKRDASIKEQLSGVKDTSSEVKQLEEQANAVMRAARAEISAA-------- |
4 | 1st6A | 0.06 | 0.06 | 2.55 | 0.61 | MUSTER | | GKERREILGTCKTLGQMTDQLADLRARGQGATAMQKAQQVSQGLDLLTAKVENAARKLEAMTNSKQAIAKKIDAAQNWLADPNGGSE |
5 | 5cwgA | 0.17 | 0.17 | 5.64 | 0.55 | CNFpred | | SEVLELAIRLIKEVVENAAARAAAEAFKRVA-SSEVLELAIRLIKEVVENAQDISEAARAAAEAFKRVAEAAKRAGITSSETLKRAI |
6 | 6fkfb | 0.12 | 0.11 | 4.06 | 0.35 | HHsearch-2 | | LATN-LINLS---VVLGVLIFFGKGVLSDLLDNRKTIRNSEELRGKAIEQLEKARARLKKVEMDADQFRVNGYSEIEREKMNLINST |
7 | 5cwbA1 | 0.14 | 0.13 | 4.34 | 0.75 | Neff-PPAS | | LKRSGTSEDEIAEEVAREISEVIRTLKESGSSYEVICECVARIVAEIVEALKRSGTSEDEIAEIVARVISEVIRTLKESGS------ |
8 | 2kk7A | 0.13 | 0.08 | 2.77 | 0.46 | HHsearch | | ----------------------------MAVKLMGVDKIKSKILD---DAKAEANKIISEAEAEKAKILEKAKEEAEKRKAEI---- |
9 | 3n9iA | 0.22 | 0.21 | 6.52 | 0.68 | SP3 | | DILSGVTGQSIPELEAQFTGQM-YGHLKGAVADSELQERYRTYREDEALLQDVMREGAAKARARAQVTLAKVYEAIGFVAQP----- |
10 | 5cwqA2 | 0.17 | 0.17 | 5.66 | 0.53 | PROSPECTOR2 | | SEEAERASEKAQRVLALIAIALAVLALAEVACCRGNKEEAERAYEDARRVEEEARKVKESAEEQAEEAEQLAREARRHRGGWLEHHH |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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