Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | GELVKDLSTQVSTLVRQELELAKVELTAKGKQAGIGAGMFGGAGLFGLYGVGALVACAILALATAVDGWLAALIVAVVLLVVAGVLALAGRARARRAGPPMPEQTVETLKEDVRY |
1 | 5cwjA | 0.14 | 0.14 | 4.73 | 0.94 | SPARKS-K | | RRILKEARKSLRQAIEDVAQLAKSEVLEEAIRVILRIAKESGSEEALRQAIRAVAEIAKLRIAKESGSEEALRQAIRAVAEIAKEAIRVIRQIAEESGS---EEARRQAERAEEE |
2 | 4hkrA | 0.15 | 0.14 | 4.71 | 1.00 | FFAS-3D | | -RKLQLSRAKLKASSKTSALLSGFAMVAMVEAFAICTTLLVAVHMLALLILFLLEIAILCWVKFYDLSRRAAWSATVVLIPVMIIFMAFAIHFYRSLVSHKYEVTVSGIRE---- |
3 | 5x5yF | 0.12 | 0.09 | 3.05 | 0.32 | HHpred | | -----------------DNPRYQAELQWRLSTPLLVFVVTLLAVPLSRGYLALLIAVRGQLDKGKIPMAIGLWWVHGLFLAIGLLLFYWEPLRLKLAS----------------- |
4 | 5cwmA1 | 0.12 | 0.12 | 4.26 | 0.89 | MUSTER | | --DPEDELKRVEKLVKEAEELLRQAKEKGSEEDLEKALRTAEEAAREAKKVLEQAEKEGDPEVALRAVELVVRVAELLLRIAKESGSEEALERALRVA-EEAARLAKRVLELAEK |
5 | 4dx6A | 0.12 | 0.12 | 4.27 | 0.76 | CNFpred | | TPFVKISIHEVVKTLVEAIILVFLVMYLFLQNFRATLIPTIAVPVVLLGTFAVLAAFSINTLTMFGMVLAIGLLVDDAIVVVENVERVMAEEGLPPKE--ATRKSMGQIQGALVG |
6 | 4ev6A | 0.11 | 0.09 | 3.17 | 0.60 | HHsearch-2 | | RENFEDLYATYREVLTSMMDITLSLENIKMNQIMK--ILTMVTTIFAVPMWITGIYGMNFSYLPLANNPQGFWLVMALMVVIIMIFVYIFR----RS--GWI------------- |
7 | 5cwmA1 | 0.13 | 0.12 | 4.25 | 0.92 | Neff-PPAS | | ---PEDELKRVEKLVKEAEELLRQAKEKGSEEDLEKALRTAEEAAREAKKVLEQAEKEGDPEVALRAVELVVRVAELLLRIAKESGSEEALERALRVAE-EAARLAKRVLELAEK |
8 | 4ev6A | 0.11 | 0.09 | 3.13 | 0.96 | HHsearch | | RENLIDMSATYREVLTSMMDITLSLENIKMNQIMK--ILTMVTTIFAVPMWI----TGIYGMNFLANNPQGFWLVMALMVVIIMIFVYIFRRS--G----WI------------- |
9 | 3hazA4 | 0.16 | 0.16 | 5.23 | 0.64 | SP3 | | AHLLESRSAHFIALLQREGGKTLDDALSELREAADFCRYYAAQGRKLFGSETAMPGFVAISLAIFLGQVTAALMAGNSVVAKTPRIAREAVALLHEAGIPKDGRIGAALTAHPDI |
10 | 3v6gA | 0.10 | 0.10 | 3.82 | 0.62 | PROSPECTOR2 | | GALREAALAHAANASADLLAQWRSDLAATLARLTTVYLADQDRYRTLNELYMAALQRLARLWPDGLLALLEPRIGRRAANAVTVFFDGATLHALITGTPLSTDELTDAIARLVAG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|