Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | NISTAFAIYFVLWWLVLFLTLPFGVRSQHEDGEGAPGTDPGAPVMARMGRKLIWTTVISAVIFAVAMWAYYQGYFNIERL |
1 | 3s0xA1 | 0.07 | 0.06 | 2.59 | 1.22 | SPARKS-K | | ILINSISGFVICFILGIGLGALVPKFQPIYTSLNLNYVPTFPI--------VFINGIFIIPITLSYLVTPIIGDRILDFL |
2 | 4h33A | 0.07 | 0.07 | 3.02 | 1.14 | Neff-PPAS | | NRFLMIFVLLVIIIPVPMVFIEPEINNYPDALWTTVGYGDIVPVTPIGRILASIMMLFGIAFIGMITSTITNFFRCKKPT |
3 | 3jycA1 | 0.07 | 0.07 | 3.02 | 1.14 | SPARKS-K | | MLLLFSLAFLVSWLLFGLIFWLIALIHGDLENPGGDDTFKPCVLQVNGFVAAFLFSIETQFMVVVQSIVGCIIDSFMIGA |
4 | 3dl8G | 0.13 | 0.11 | 3.90 | 0.57 | FFAS-3D | | --IFYNFLYVTFIVFFTYFYTAVLINPVEKAGAFIPGVRPGQDTVKYLERIINRLIFFGALFLSVIALIPI--------- |
5 | 2akhY | 0.17 | 0.15 | 4.94 | 0.32 | HHpred | | --PLYVLLYASA--IIFFCFLVFNPRETAKSGAFVPGIRPGEQTAKYIDKVMTRLTLVGALYITFICLIPEFRDA----- |
6 | 4r1iA | 0.14 | 0.14 | 4.71 | 0.92 | MUSTER | | MAASTFVIALIGYFVTEKIVEPQLGPYQSDLSQEEKDIRHSNEITPLEYKGLIWAGVVFIALSALLAWSIVPGILRHPET |
7 | 5xtcl | 0.10 | 0.07 | 2.79 | 0.79 | CNFpred | | DIKKIVAFSTSSQLGLMMVTIGINQ-------------------PHLAFLHICTHAFFKAMLFMCSGSIIHNLEQDIRKM |
8 | 3mk7C | 0.15 | 0.14 | 4.64 | 0.50 | HHsearch-2 | | GYIALLTLGTIVALFWLI-FATRKGESAG-TTDQTMGHADGIEELPRWWFLLFIGT----LVFGILYLVLYPGLGNWKGV |
9 | 5v4sA3 | 0.09 | 0.09 | 3.36 | 1.08 | Neff-PPAS | | RLVLFAFWATLVAHWCAVGWLYVDDLLDYQTGIATVGYGDITPSTDSQRIYTIFVMILGAGVYATVIGNIASILGSLDLA |
10 | 3dinC1 | 0.24 | 0.24 | 7.40 | 0.53 | HHsearch | | GGFLYLLIYGVFFFTYFYSVVIFDPREISKYGGYIPGLRPGRSTEQYLHRVLNRVTFIGAVFLVVIALLPYLGAIKVNV- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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