Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | MKHPSNRELFAYWNDRRGHAKAPERSEFEPSAVRELLGDIFVLSCDAELGFPFRMAGTRLCALLGGDVKDKSFPAQFTPASRREIEEIVTVVSEETLPAIAGVKAQAPDRTTASFELLLLPFATRAHEPISLTGLL |
1 | 6ideA1 | 0.12 | 0.10 | 3.40 | 1.10 | SPARKS-K | | -----------------------PNHLTLEQISLFKQLPGYWGCKDLN--SVFVYANQAYGELIGLDCIGRTDFEMPSAACAAEFQQQDRYVIETGHSVKVLDIHPYPDGHWHAHIFTKTPWRDSQGKIQGTIFFG |
2 | 5k7lA1 | 0.16 | 0.14 | 4.62 | 1.03 | MUSTER | | --------------------LVAPQNTFLENIVRRSNDTNFVLGNAQIVDWPIVYSNDGFCKLSGYEVMQKACSFMYGELTDKDTVEKVRQTFENYEMNSFEILMYKKNRTPVWFFVKIAPIRNEQDKVVLFLCTF |
3 | 3p7nA1 | 0.13 | 0.10 | 3.57 | 1.57 | Neff-PPAS | | ----------------------------WVLDLIEASPIASVVSDPRLADNPLIAINQAFTDLTGYECVGRNCRFLAGSGTEPWLTDKIRQGVREHKPVLVEILNYKKDGTPFRNAVLVAPIYDDDDELLYFLGSQ |
4 | 3p7nA1 | 0.14 | 0.11 | 3.77 | 1.06 | SPARKS-K | | ----------------------------PAQWVLDLIEIASVVSDPRLADNPLIAINQAFTDLTGYSCVGRNCRFLAGSGTEPWLTDKIRQGVREHKPVLVEILNYKKDGTPFRNAVLVAPIYDDDDELLYFLGSQ |
5 | 3h9wA | 0.18 | 0.12 | 4.06 | 0.98 | FFAS-3D | | -----------------------------------------PWKINWQTAFEY--IGPQIEALLGWSWKSVEDWATRHPEDQEWVVNFCVKQSECGVDHEADYRALHRDGHYVWIRDVVHVVRDDSGEVEALIGFF |
6 | 6ideA1 | 0.14 | 0.11 | 3.79 | 0.61 | HHpred | | ----------------------PNHLTLEQISLFKQLPGYWGC---KDLNSVFVYANQAYGELIGLKCIGRTDFEMPSPTAAAEFQQQDRYVIETGHSVKVLDIHPYPDGHWHAHIFTKTPWRDSQGKIQGTIFFG |
7 | 6i20B | 0.14 | 0.12 | 4.01 | 1.03 | MUSTER | | -----------------------GAMDYSLVKALQTAQQNFVISDPSIPDNPIVYASQGFLTLTGYEVLGRNCRFLQGPETDPKAVEKVRKGLERGEDTTVVLLNYRKDGSTFWNQLFIAALRDGEGNVVNYLGVQ |
8 | 3p7nA | 0.13 | 0.10 | 3.59 | 0.88 | CNFpred | | --AQWVLDLIEA------------------------SPIASVVSDPRLADNPLIAINQAFTDLTGYSCVGRNCRFLAGSGTEPWLTDKIRQGVREHKPVLVEILNYKKDGTPFRNAVLVAPIYDDDDELLYFLGSQ |
9 | 4r3aA | 0.09 | 0.07 | 2.77 | 0.76 | HHsearch-2 | | ----------------------------HDKEAWGRLPFSLIADIS-QDDEPLIYVNRAFEQMTGYSVVGRNCRFLQGEKTDPGAVERLAKAIRNCEEVEETIYNYRADGEGFWNHLLMGPLEDQDEKCRYFVGIQ |
10 | 6i20B | 0.14 | 0.12 | 4.01 | 1.46 | Neff-PPAS | | -----------------------GAMDYSLVKALQTAQQNFVISDPSIPDNPIVYASQGFLTLTGYEVLGRNCRFLQGPETDPKAVEKVRKGLERGEDTTVVLLNYRKDGSTFWNQLFIAALRDGEGNVVNYLGVQ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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