Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | ADRAVGFLLCCISLSIFTYYTLWVIILPFVDSDHFIHQYFLPQEYAIIIPVLAGVTLLCFLSVFIGSVMLKSKKKK |
1 | 6a2jA3 | 0.08 | 0.08 | 3.13 | 1.22 | SPARKS-K | | KMQFHMIGILIYSYIVLFVWIIVAAVHAITKDQKQIFWGWISCLIFITLQALSGIMIVYSFIACLFGVLCYFLLLI |
2 | 4h33A | 0.12 | 0.12 | 4.20 | 1.11 | Neff-PPAS | | RSNGLNRFLMIFVLLVIIIPVPMVFIEPEINTTVGYGDIVPVTPIGRILASIMMLFGIAFIGMITSTITNFFRCKK |
3 | 5nl2A3 | 0.16 | 0.14 | 4.83 | 1.17 | SPARKS-K | | PAYFTNLVSIIFMIAVTFAIVLGVIIYRISTAARV------TVTATAVIINLVVIILLDEVYGCIARWLTKIEVPK |
4 | 4jq6A | 0.10 | 0.09 | 3.42 | 0.68 | FFAS-3D | | --KTSLTVAGLVTGVAFWHYLYMRGVWIYAGETPTVFRYI---DWLITVPLQIIEFYLILVMLIGGFIGEAGLGDV |
5 | 3vr8D | 0.09 | 0.09 | 3.47 | 0.23 | HHpred | | IERYFAAAMVPLIPAAYFIDLCLALALTLHVVWGVVNDYGRPFVLGDTLAVRVGAY-IFTACLLAGLLYFNEHDVG |
6 | 5uz7R | 0.14 | 0.14 | 4.91 | 0.87 | MUSTER | | EKQRLRWYYLLGWGFPLVPTTIHAITRAVYFNDNCWLSVETHLLYIIHGPVMAALVVNFFFLLNIVRVLVTKMRET |
7 | 6f34A | 0.07 | 0.07 | 2.75 | 0.91 | CNFpred | | --VLSFILSGLACVFAALCYAEFASTVPVSSAYTYSYATFGEIAWILGWDLILEYGVASSAVAVGWSGYFQGLLSG |
8 | 3jacA | 0.10 | 0.09 | 3.42 | 0.64 | HHsearch-2 | | PTRILGNFLKKYNHLNLFLFQGFRLV-PFLVESNWMEKKYPQPKYGMGGLII----LFLIAIIWFPLLFMSLNQPI |
9 | 5a6eB | 0.11 | 0.11 | 3.83 | 0.93 | Neff-PPAS | | -FNQVLILICTLLCLVFTGTCGIQHLERAGEKLSLFKSFYPKIWPSQLLVVIMICVALVVLPLQFEELVYLWMERQ |
10 | 5xnlW | 0.16 | 0.08 | 2.62 | 0.46 | HHsearch | | SNNLLGWILFGVFGLIWALYFIYASGLDE-DEESGL-SL------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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