Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | MKPIIEFCISNLASGTQEVMEELEKDPDLDVIEYGCLSYCGMCARSRYALVNGDMVTGDTNDELLQNIYQYLEDN |
1 | 5xf9A1 | 0.17 | 0.16 | 5.28 | 1.61 | SPARKS-K | | ARYQIHFVDHDHHAGVAALCNHLCAAARLFVGWTACAGL---SDQAPAALINGRPMPRLDAARIDALIEKIQAQI |
2 | 5xf9A1 | 0.14 | 0.13 | 4.53 | 1.01 | FFAS-3D | | -RYQIHFVDHDHHAGVAALCNHLCAAFAIFVGWTACAGLSDQ---APAALINGRPMPRLDAARI-DALIEKIQAQ |
3 | 5xf9A1 | 0.18 | 0.17 | 5.64 | 1.16 | HHpred | | ARYQIHFVDHDHHAGVAALCNHLCAAADLFVGWTACAGLSDQ---APAALINGRPMPRLDAARIDALIEKIQAQI |
4 | 5xf9A1 | 0.18 | 0.17 | 5.64 | 1.84 | MUSTER | | ARYQIHFVDHDHHAGVAALCNHLCAAARLFVGWTACA---GLSDQAPAALINGRPMPRLDAARIDALIEKIQAQI |
5 | 5xf9A | 0.17 | 0.16 | 5.27 | 1.25 | CNFpred | | ARYQIHFVDHDHHAGVAALCNHLCAA-RLFVGWTACAGLSDQ---APAALINGRPMPRLDAARIDALIEKIQAQI |
6 | 5lnk2 | 0.19 | 0.19 | 6.00 | 1.53 | HHsearch-2 | | GKYHIQVCTTCMLRNSDSILEAIQKKPLFTLIEVECLGACVN---APMVQINDNYYEDLTPKDIEEIIDELKAGK |
7 | 5xf9A1 | 0.17 | 0.16 | 5.27 | 1.46 | Neff-PPAS | | -RYQIHFVDHDHHAGVAALCNHLCAAARLFVGWTACAGLSDQ---APAALINGRPMPRLDAARIDALIEKIQAQI |
8 | 5xf9A1 | 0.17 | 0.16 | 5.27 | 2.30 | HHsearch | | ARYQIHFVDHDHHAGVAALCNHLCAAARLFVGWTACAGLSDQ---APAALINGRPMPRLDAARIDALIEKIQAQ- |
9 | 5xf9A1 | 0.18 | 0.17 | 5.64 | 0.73 | PROSPECTOR2 | | TRYQIHFVDHDHHAGVAALCNHLCADARLFVGWTACAGLSDQ---APAALINGRPMPRLDAARIDALIEKIQAQI |
10 | 3iam2 | 0.21 | 0.19 | 5.92 | 0.74 | SAM | | -KYHLQVCATCKLAGAEELWDYLTET-DFSVQKVECLGSCHT---APVIQVNDEPYECVTRARLEALLAGL---- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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