>PF07287 (356 residues) IANCSGFYGDRLSAAREMVEGGPIDVLTGDYLAELTMMILYKDRQKDPAAGYARTFLRQL EEVLATCVERGIKIVSNAGGLNPGGLAAAVRALANRLGVRVRVAHIEGDDLLPRLAELQA QGHELRHLDKGMPLRDLKAQVVTANAYLGGWGIAEALRRGADVVICPRVTDAALVVGPAA WYFGWARDDWDRLAAAVVAGHIIECGAQCTGGNYSFFREVPNIERIGFPIAEMHEDGSFV ITKHPGTGGLVSIGTVTAQLLYEIQGPRYLNPDVTARFDTIQLEQEAADRVRVTGVRGEP PPATTKVCINYLGGFRNSVTFVLTGLDIEEKAAIAQQTLWHLVGGKERFAEVHVDL |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | IANCSGFYGDRLSAAREMVEGGPIDVLTGDYLAELTMMILYKDRQKDPAAGYARTFLRQLEEVLATCVERGIKIVSNAGGLNPGGLAAAVRALANRLGVRVRVAHIEGDDLLPRLAELQAQGHELRHLDKGMPLRDLKAQVVTANAYLGGWGIAEALRRGADVVICPRVTDAALVVGPAAWYFGWARDDWDRLAAAVVAGHIIECGAQCTGGNYSFFREVPNIERIGFPIAEMHEDGSFVITKHPGTGGLVSIGTVTAQLLYEIQGPRYLNPDVTARFDTIQLEQEAADRVRVTGVRGEPPPATTKVCINYLGGFRNSVTFVLTGLDIEEKAAIAQQTLWHLVGGKERFAEVHVDL | |||||||||||||||||||
1 | 4v1xA | 0.11 | 0.09 | 3.23 | 0.64 | SPARKS-K | INENADSAIGNIEAAMAVYGEVGVRVVYARMFFDRIQGYVDALKARSPQMEETAVAKDRITALSDQYHGTAISVWPAPATTTAVEGMRWAQAFARDRAVMWTLHMAESDHDESPAEYMECYGLLDERVAHCVYFDRKRHNVKVASQVSGVAPVPEMVERGMAVGISNDSVNMIGDMKFMAHIHRLTPEKILEMATIDGARSL-------------GMDH-----EIGS----IETGKRADL--------------------------------ILLDLR-------HPQ--------TTPHHHLAATIVFQAYGNEVDTVLILSFLPFLEEAQSRATAILQRANMVANPAWRSL-- | |||||||||||||
2 | 3ajxA | 0.18 | 0.08 | 2.56 | 0.62 | FFAS-3D | ---------DSTEAALELAGKEYVDIIELG-------TPLIKA--------EGLSVITAVKKEADIAFKAGADLVTVLGSADDSTI-AGAVKAAQAHNKGVVVDLIGIEDKATRAQEVRALGAKAKPGFDLNGLLAAGEKARVPFSVAGVATIPAVQKAGAEVAVAGGAADPAAAAKELR-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
3 | 2d73A | 0.11 | 0.09 | 3.32 | 0.41 | HHpred | ---KHSANTANVKRYIDFAAAHGFDAVLVEGGWEDWF---GNSYVFDFVTPY-PD--FDVKEIHRYAARKGIKMMMETSASNYERHMDKAYQFMADNGYNVKSGYVGHYGQWNHYLYAVADYKIMVNAHEARPICRTYPNLIGNESARGTEPFTRLVGGPMDYTPGIFETHCN--------KMNPRSTIARQLALYV----TMYSPLQMAADIPENIKDVALWDETNYLEAEPG--EYITIARKATDDGCTAGENGH-----TSKLVDFLTPGKQY---IATVYADAKDAYTIKKGI-LTNKSKLNLHAANGGGYAISI---KEVKD----------------------------- | |||||||||||||
4 | 3i45A | 0.12 | 0.10 | 3.60 | 0.69 | MUSTER | IGSQIPAFTLPYRNGWQLAVE-PLEVISRDGDPGKAVTAAQELLTRHGVHA--TFLSHVGLAVSDFARQRKVLFMASEPRPSTYMQAAMLAAEAAKLPIT-RWATIAPNYAVARFKELLLAARPEVTFVAEQWPALYKLDA--------GPTVQALQQAEPEGLFNVLFGADLPKFVREGRVRGLEPEYLNPLKDEAPEGWIV------TGYPWYDIDT-APHRAF---VEAYRA-KE-----DPFVGSLVNTLTAMAVAFEKAGG---TESETLVELKDMAFSTPM--PLSFRASDHQSTMGAWVGRTALRDG--KGVMVDWRYVDGGSVLPPPEVVSAWRPAG----------- | |||||||||||||
5 | 2bb0A | 0.12 | 0.08 | 2.77 | 0.80 | CNFpred | ---------KQLRVAKKLHESQPVDLVSTFMGAHAIPPEYQ---------NDPDDFLDQMLSLLPEIKEQLASFADIFTETFTVSQSRRYLQKAAEAGFGLKIHADEID-PLGGAELAGKLAVSADHLV-DEGIKKLAGTIAVLLPGT-YARARAMIDEGVCVSLATDFNTENIQLIMSIAALHLKMTAEEIWHAVTVNAAYAIGKGE--------------------EAGQLKRSADLVIWQAP----------NYMYIPYHY------VNHVHQVMKNGTIVVNR--------------------------------------------------------------------- | |||||||||||||
6 | 3bofA1 | 0.15 | 0.11 | 3.60 | 0.38 | HHsearch-2 | --------MRNRREVSKLLSE---RVLLLDGAYG---TEFMKYGYDLPE-ELNIKAPDVVLKVHRSYIESGSDVILNTFGATRMKLRKNAVRIARRAG-EKLVFGDIGPT--------------------GELPYPLG-STLFEEFYENFRETVEIMEEGVDGIIFETFSDILELKAAVAREVDVFLMTFDRTDPANFAITFDELDIDALGI-------------------------------------NCSLPEEILPIFQQYDKFVEPNAGKPIV-------ENG--KT-VYPL----KPHDFA---VHIDSYYELG-VNIFGTTPEHVKL-----FRKVLGNRLQRKKKR--- | |||||||||||||
7 | 4zpjA | 0.16 | 0.14 | 4.60 | 0.74 | Neff-PPAS | IEDSAGQPEQAITKTRQLIERDRVHLIAGITLSNEAAAVRDILVQAEPTIVTNAGLQALTRD------PARSPYLFRVSFANGQYDAPAADYAYETLGYR-RVLHAADYAAGHEEAAFRSRFEQAG----GEIVDEVVAPIGTQDFGPYLQRIEQAAAEADAVFAFHGTSTDAIRFLVQYQEFGLKDSIPLIPSGADVDQSILPEIGDAALGLYTAYNDTPESQEFVEAFTARHEGILP----GLVDYAGYIGGRVIAEALTAIDGEVENKEALLEALKAVEFTGPA-GNFRFHPESQGPVTTILLCRVEQLGTYANIVVDRIPDFDDLSF------------------------- | |||||||||||||
8 | 2dc1A3 | 0.19 | 0.03 | 0.90 | 0.27 | HHsearch | ------------------------------------------------EA----ASQQAVKDYAEKILKAGIDLIVSTGAFADRDFLSRVREVCRKTGRRVYIA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ | |||||||||||||
9 | 5tpwB | 0.09 | 0.05 | 1.96 | 0.81 | SP3 | -----------ITHVCDLMSGARIHGLVF---------------------GDDTDQEAVAQMLDFISSQTFIPILGIHGGASIQQQATVMLKIMQDYDWH-VFSLVTTIFFISFIKTTVDNSFVGWDMQNVITLDTSFE----------DAKTQVQLKKHSSVILLYCSKDEAVLILSEARSLGLYSLEARVRDGLGILTTAASSMLEKFSYIPEAKASCYYQVHPRLVVIVLNKDREWEKVGKWENQTLLRH------------------------------------------------------------------------------------------------------- | |||||||||||||
10 | 4f11A | 0.08 | 0.07 | 2.74 | 0.87 | PROSPECTOR2 | IMGLMPLTKEVVLPAVELANESLLRLRLYDTECDNAKGLKAFYDAIKYGPNHLGVCPSVTSIIAESLQGWNLVQLSFAAVPSDNAVNPAILKLLKHYQWK-RVGTLTQDVVRNDLTGVLYGEDI---------------EISDTESFSNCTSVKKLKGNDVRIILGQFDQNMAAKVFCCAYEENMYGSKYQWIIPGW-------YEPSWWEQVSRCLRKNLLAAMEGYIGVDFEPLS----SKQIKTISGKTPQQYEREYNNKRSGVGPSKFHGYASSRHQRIQDFNYTQVVFRNGERMG---TIKFTQFQDSREVKVGEYN------------------------AVADTLEIDK | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |