Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | SWDDNTKIKRIQELLTIYNRMAPSLRPDERARMDRFISGYTGEIMVDGVPSQGGARRIFKKILSPAAKSVATGFFT |
1 | 5eqzA1 | 0.07 | 0.07 | 2.66 | 0.71 | SPARKS-K | | HHHYVEEKKEIDSLMEDVLALVNDSSKDYKDKINELKENLKD-------IGNAELKEKLLNLQNSFQDKLAAKL-- |
2 | 2v6lZ | 0.10 | 0.09 | 3.42 | 0.63 | FFAS-3D | | SVTVPNDDWTLSSLSETFDDGTQTLQGELTLALDKLAKNPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIK----- |
3 | 2fm8C | 0.21 | 0.20 | 6.26 | 0.40 | HHpred | | SNNVAGK-KAIMEFAGLFRSALNSDSPEAKTLLMKVGAEYTAQIIKDGLKEKGPWLKKAEAKLENLEKQLLD---- |
4 | 1k30A1 | 0.18 | 0.17 | 5.59 | 0.95 | MUSTER | | HSRKFLDVRSEEELLSCIKKETGKLPPNVAAGMEELYQNYRNAVIESGNPADEIVLSNMTVALDRILLDVED--FV |
5 | 3s9vA | 0.11 | 0.11 | 3.80 | 0.47 | CNFpred | | --KCREVYTKTSNFTVILDDLYDHGSLDDLKLFTESVKRWD-LSLVDQMPQMKICFVGFYNTFNDIAKEGRERQGR |
6 | 2zciA | 0.05 | 0.03 | 1.25 | 0.36 | HHsearch-2 | | TAPAEQWANDVEDNAEYLTFLGPRVPAEVHSQFDALKARIS----------------------------------- |
7 | 2kubA | 0.08 | 0.08 | 3.11 | 0.77 | Neff-PPAS | | --NLDKMISEAEVLNDMAARKLITLDAEQQLELMKSLVATQSQNLIGDPNATVADLQIAYTTLGNNTQALGNELIK |
8 | 5wwoA2 | 0.16 | 0.12 | 3.96 | 0.59 | HHsearch | | CVYGEDATRVHKAFLTFAQRYKNDITQDQRDFLLETVRQRGKDIGP----------EIRRELLAGASR-------- |
9 | 1k30A1 | 0.19 | 0.18 | 5.96 | 0.84 | SP3 | | HSRKFLDVRSEEELLSCIKKETGKLPPNVAAGMEELYQNYRNAVIESGNPADEIVLSNMTVALDRILLDVEDPFF- |
10 | 2kubA | 0.07 | 0.07 | 2.76 | 0.44 | PROSPECTOR2 | | E-NLDKMISEAEVLNDMAARKLITLDAEQQLELMKSLVATQSQLEADPNATVADLQIAYTTLGNNTQALGNELIKL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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