Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| Seq | MRKPAAGFLPSLLKVLLLPLAPAAAQDSTQASTPGSPLSPTEYERFFALLTPTWKAETTCRLRATHGCRNPTLVQLDQYENHGLVPDGAVCSNLPYASWFESFCQFTHYRCSNHVYYAKRVLCSQPVSILSPNTLKEIEASAEVSPTTMTSPISPHFTVTERQTFQPWPERLSNNVEELLQSSLSLGGQEQAPEHKQEQGVEHRQEPTQEHKQEEGQKQEEQEEEQEEEGKQEEGQGTKE |
1 | 5yfpC2 | 0.07 | 0.07 | 2.71 | 0.97 | SPARKS-K | | TSSIYDRIYNFVALMEHIERLLVAELAEDALETGCPHLLEIHFLLTSARD---FQEQV---VVMAKEATEDAQRTVMKLF---------SRLSGIIS-KFDKLLDGLTYDIVIRNIIKKKEIEIEKSSIKKLPNSKNTARLQDETPKVIEYPTNKGLYQEIMSGTISTRTAPRGYKHFLING-INNSISEMFGEMREKYVGDQKFDVLDNMDWIFNELIIVKEHIANCCPPHWNI----- |
2 | 2akhY | 0.13 | 0.12 | 4.37 | 0.61 | FFAS-3D | | ISIFALGIMPYISASIIIQLLTVVHPTLAEIKKEGESGRRSQYTRYGTLVLAIFQSIGTAVVSLVTGT--MFLMWLGEQITERGIGNGIIVAGLPPAQGDLHFLVLLLVAVLVFAVTFFVVFVERGQRRIVVNYAKRQQGRRVYAAQSTHLPLKVNMAGVIPAIFASSIILFPATIASWFGTALVFNPRETADNLKKSGAFVRPGEQTAKYIDKVVVIMDFMAQVQTLMMSSQYESALKK |
3 | 2pffB | 0.17 | 0.12 | 4.11 | 0.43 | HHpred | | ---PISCPLIGVIQLALLGFTPGELRS-YLKGATGQGLATDSWESFFVSVRKAITVLFFIGVRCYEASLPPSILEDSLENNEGVPSPMLSISNLTQE-------QVQDYVNKT----NSHLPAGKQVEI-----------SLVN-------GAK-N------LVVSGPPQSLYGLNLTLRKAKAPLQSRIPFSERKFSNRFLPVASPFHSHLLVPA------------------------ |
4 | 6etxG | 0.13 | 0.12 | 4.35 | 0.82 | MUSTER | | GQIRVFNHSRDRWLRVLSPFAPGINEESCFSFLRFIDISPAEMANLMLQLLARWLALFLSLKASYRLHQLRSWGAPEGESHQRYLRNKDFLLGVNFPLSFPNLCSCPLLKSLVFS-----SHCKAVSGYSDQVVHQRRSATSSLRRCLLTELPSFLCVASPRVTAVPLDSYCNDRSAEYERRVLKEGGSLAAKQCLLNGAPELAADWLNRRSQFFPEPAGGLWSIRPQNGWSFIRIPGKE |
5 | 4mt7A | 0.10 | 0.05 | 2.00 | 0.61 | CNFpred | | ---------LKDICEGYLKQCR----------KRRDMFSDEQLKVIFGNIEYRFQMGFVRDLEKQYNNDDPHLSEI-----------GPCFLEH--QDGFWIYSEYCNNHLDACMELSKL---------MKDSRYQHFFEACRLLQQMI----------------IAIDGFLLTPVQKICKYPLQLA----------------------------------------------------- |
6 | 2pffB | 0.14 | 0.13 | 4.52 | 1.13 | HHsearch-2 | | LSIPISCPLIGVIQLALLGFTPGELRS-YLKGATGQGLETDSWESFFVSVRKAITVLFFIGVRCYEASLPPSILEDSLENNEGVPSPMLSISNLTQE-QVQDYVNKT-----NSHLPAGKQVEISLNGALRKAKAPGLQSRIPFSELPVASPFHSHLL-------VPASDLI---NKDLVKNNVSFNAKIPVYRVLSGSISERIVDCIIRLPVKWETTT--QFKLGVLTHRNKDGTGVRV |
7 | 4wrtB2 | 0.11 | 0.10 | 3.65 | 0.97 | Neff-PPAS | | ---GVAGVNESADMAIGMTIIKNNMINNGM----GPATAQTAIQLFIADYRYTYKCH-----RGDSKVEGKRMKIIKELWENTKGRDGLLVADGGPNIYNLRNLHIPEIVLKYNLMYKGRLLHPQNPFVGHLSIEGIKEADITKMDYDAVSGTHSWRTKRNRSILNTDQRNMILEEQCYAKCCNLFEACFNSASYRKPVGQHSMLEAMAHRLRMDARLDYESGRMSKDDFEKAMAHLGEI |
8 | 2jm0A | 0.32 | 0.04 | 1.13 | 0.37 | HHsearch | | -------------------------------------LSDEDFRAVFAN-LPLWRQQ---NLRRERGLF--------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
9 | 3sdeA | 0.15 | 0.13 | 4.35 | 0.72 | SP3 | | -------------------DIKSFLKPGEKTYTQRCPITEEDFKRLFERYGEP----SEVFINRDRGFESRTKAELDGTILKSRTHGAALVKNLSPVSNEQAFSQFG------PVEKAVVVVDDRGRATAAKPPARKADGAFLLTTTPRPVIVEPMEQFDDEDGL---PEKLMQKTQQYHKEREQPPRFAQPGTFEFEYASRWKALDEMEKQQREQVDRNIREAKEKLEAEMEAARHEHQ |
10 | 1pc3A | 0.10 | 0.09 | 3.25 | 0.82 | PROSPECTOR2 | | VATTPASLLYPLFNLWGAYLSEGDMAAHKGGVSEHLKLNGKVLAAMYQGTIKTWDDPQIAALNPGVNLPGTAVVGWGKSPGFGTTVDFPAVPGALGENGNGGMVTGCADQASQRGLGEAQLGNSSGNFLLPDAQSIQAAAAGFASKTPANQAISMIDGPAPDGYPIQKDAATAQTLQAFLHWAIT---------------------------DGNKASFLDQVPPAVVKLSDALIATISS |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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