Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | AWFATDVNLINCILKDNLFLVDNNYIILNVFDQETDQVRPLCLGEINALQTDAAAQADAMLDTSSTSELQS |
1 | 2p38A1 | 0.14 | 0.14 | 4.80 | 0.90 | SPARKS-K | | RASSWELDLILKEAEKYGELLHEFFCVVEVYAVNDINMRPYSLGFVGTIRVDENLVEKFYPNLEFFSLIKL |
2 | 6g8yA | 0.15 | 0.07 | 2.38 | 0.33 | FFAS-3D | | -----DYRRITSIFNEH----CGRTLKVNIWSAKGGTFRDEYI---------------------------- |
3 | 5ifeA1 | 0.18 | 0.14 | 4.61 | 0.27 | HHpred | | -------------KQQEIVVSRGKILELLRPDPNTGKVHTLLFGVIRSLMAFRLGTKDYIVVGSDSGRIV- |
4 | 5utvA | 0.10 | 0.10 | 3.61 | 0.90 | MUSTER | | SHMTAVQDFVVDILLNGADVLQTT-KVYKTICKRGN--TYLCFDNLYAITGDVVLKFATVSKARAYLETK- |
5 | 5tdlA | 0.09 | 0.07 | 2.65 | 0.55 | CNFpred | | KLMSSNVQIVRQQSYSIMCVVKEEVIAYVVQLPIYGVIDTPCWKLHTSPLCTT------------------ |
6 | 1ethA1 | 0.12 | 0.06 | 1.97 | 0.51 | HHsearch-2 | | --------------------------------------SEVCFPRLGCFSDDA-PWAGPLKILPWSPKDVD |
7 | 4ea7A1 | 0.10 | 0.08 | 3.15 | 0.90 | Neff-PPAS | | --GGHAKVVIESLRACG-------ETVAAIVDADPAVLGVPVVGDDLALPMLREQGLSRLFVAIGDNRLRQ |
8 | 2pvsB1 | 0.16 | 0.07 | 2.34 | 0.56 | HHsearch | | --------------------------------------KEVCYGQLGCFSDEK-PWAGPLLPWSPDIDTR- |
9 | 5oh5A3 | 0.12 | 0.11 | 3.94 | 0.78 | SP3 | | GLEKSDTDTLVAILKNNPEEC-RAYI-----ESKKPGLGNFSEGNVHGWLKEEYTPTIPPKAINKSTGVL- |
10 | 5utvA | 0.10 | 0.08 | 3.17 | 0.40 | PROSPECTOR2 | | SHMTAVQDFVVDILLQTTCTVDRKVYKTICKRGNDDTNLYAITGDVVLKFATVSKARAYLE--------TK |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|