Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | AAETVLLQYRDLRLSVSLAEFQTFAADGNASPALQDFLQQTEEDPEAVRQWLTTEISPGFSSVLPQEFILLQISKTLGEPLEREDLGALGTALRAAFENDQAFSVMEVLEQYPGPNVRL |
1 | 6ifkA4 | 0.07 | 0.06 | 2.40 | 0.75 | SPARKS-K | | ----KFDRFITNVYDDKLEQIRYFFNHQDERKLIELLRNHDRMNMARLAYYLTRLEELTRETDRKFKTFKNLFYSWYTNKNDK-DRKEAELALLLYIYEIRK----------------- |
2 | 5ymaA | 0.11 | 0.08 | 3.06 | 0.68 | FFAS-3D | | ----------------RARAIERLLARDNLKRELKAHKERIKDIEFKRERSKISKYHVRFFERRKALRFAQQLERRLSKATDPVEIAQLKADLHIAQVD------IDYTKYFPFEP--- |
3 | 5b2oA5 | 0.08 | 0.07 | 2.64 | 0.25 | HHpred | | -----------------CENLHNKKYSNLSVKNLVNLIGNSNLELKPLRKYFNDKIHDHWDEQKFTETYCHWILGEWRVGVKDYSYKDLCNELKQKV---TKAGLVDFLLELDPC-RTI |
4 | 5palA | 0.09 | 0.08 | 2.86 | 0.70 | MUSTER | | ----------PMTKVLKADDINKAISA-TFDKRFFHLVGLKGKTDAQVKEVFEIKDQSGFIE----EEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGIGFAKMVAQA------- |
5 | 5vchA | 0.11 | 0.08 | 3.07 | 0.52 | CNFpred | | ----------------SAQALSYVSSLIINPQYAAKFASL----IPSVVQVLDATIR----DTTNTKLIFNCLNDFLLLDSQLTTIADLVKLALQIAVNSEDIRAVQFVTSALVYRKSK |
6 | 5gxuA2 | 0.16 | 0.12 | 3.89 | 0.34 | HHsearch-2 | | ----------------------------DNLSTVDEALDMSPDTPCNLRTALTRYAC---LLSSPKKSALVALAAHASDP---TEAERLKHDEYSKWVVESQRSLLEVMAEFPSAKPPL |
7 | 5tgwA | 0.16 | 0.14 | 4.77 | 0.64 | Neff-PPAS | | -SEFEKLRQTGDELVQAFQRLREIFDKGD-DDSLEQVLEEIEELIQKHRQLFDNRQEAADTEAAKQGDQWVQLFQRFREAIDKGDKDSLEQLLEELEQALQKIRELAEKKN-------- |
8 | 5gxuA2 | 0.15 | 0.11 | 3.69 | 0.46 | HHsearch | | --------------DNLSETVD----------EALRLLDMSPDTPCNLRTALTRYAC---LLSSPKKSALVALAAHASDP---TEAERLKHLEYSKWVVESQRSLLEVMAEFPSAKPP- |
9 | 3fs7A | 0.09 | 0.08 | 2.87 | 0.71 | SP3 | | ----------AITDILSAKDIESALSSCQAAKSFFSTVGLSSKTPDQIKKVFGI-LDQDK-SGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGIGFQSLVKA-------- |
10 | 5gp9A2 | 0.04 | 0.03 | 1.70 | 0.49 | PROSPECTOR2 | | TD--------------VEEKLKILVNMAADHKLAIVTQLELRQSNTELRLKINEVLK------GYLNLLDELLMEGKEKGYFFQEFGTLDEVVTNWVMKDCKYDLTALVKPVHR----- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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