Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | VHVIGQLIGASGFPDNRLFCKWGIHYNGGWKVLEGLTEGQTQIDNPQNEDTAYWCHPIDIHFATRGLQGWPKFHFQVWHQDSYGRVELWGYGFCHVPTSPGFHQLECVTWRPTGSIHEEISHFFLGGGLELKHSDIIYNGLDRYHLQTVAMGKVHLEINI |
1 | 3l9bA | 0.09 | 0.07 | 2.59 | 1.21 | CNFpred | | MALIVHLKTVSELRRADRIAKVTFR----------GQSFYSRVLENC-EDVADFDETFRWPVASSI-DRNEVLEIQIFNYSKVFSNKLIGTFRMVLQVEENRVEVSDTLIDD-------------------------------NNAIIKTSLSMEVRYQA |
2 | 3jzyA | 0.13 | 0.09 | 3.26 | 1.14 | SP3 | | IRLMVHVIEATELKACK-------PNGKSCEISMGSQSYTTRT--IQDTLNPKWN--FNCQFFIKDLYQD-VLCLTLFDRDQFSPDDFLGRTEIPV------------------AKIRTEQESKGPMTRRLLLHE-------------VPTGEVWVRFDL |
3 | 6gy0A3 | 0.08 | 0.06 | 2.49 | 0.88 | SPARKS-K | | QPFSIELIEGRKVNAMKLVVQAGLFHGN--EMLCKTVS----SSEVNVCSEPVWKQRLEFDISVCDLPRMARLCFALYAVVD----CPIAWANLMLFDYKDQLERCLYMWPSLLNP--------AGTVRGNPNTESAA--------------ALVIYLPE |
4 | 4ihbA | 0.11 | 0.08 | 2.93 | 0.85 | FFAS-3D | | FMLRVFILYAENVHISDAYCSAVF----------AGVKKRTKV--IKNSVNPVWNEGFEWDLKGIPLDQGSELHVVVKDHETMGRNRFLGEAKVP------------------------LREVLATPSLSASFNAPLLDTKKQ-----PTGASLVLQVS- |
5 | 6gy0A3 | 0.10 | 0.08 | 2.98 | 0.30 | HHpred | | QPFSIELIEGRKVNAMKLVVQAGLFHGN--EMLCKTVS--SSEVNV--CSEPVWKQRLEFDISVCDLPRMARLCFALYAVV----DCPIAWANLMLFDYTGER--CLYMWPSVLL-------NPAGTVR--GNPN------------TESAAALVIYLP- |
6 | 4ihbA | 0.11 | 0.08 | 2.91 | 0.89 | MUSTER | | FMLRVFILYAENTDISDAYCSAVFA----------GVKKRTKV--IKNSVNPVWNEGFEWDLKGIPLDQGSELHVVVKDHETMGRNRFLGEAKVPLATPSLSASFNAPLLDTKK---------------------------------QPTGASLVLQVSY |
7 | 4npjA | 0.08 | 0.06 | 2.49 | 1.19 | CNFpred | | GVLRIHFIEAQDLQGSDPYGIIRVG----------NQIFQSRVIKE--NLSPKWNEVYEALVYEH---PGQELEIELFDEDP-DKDDFLGSLMIDLI-PKGKLHLRLEWLTLMPNNLDKVLTDIK--ADKDQANDGL------------SSALLILYLDS |
8 | 1gmiA | 0.13 | 0.09 | 3.04 | 0.66 | HHsearch-2 | | GLLKIKICEAVSLKPLDPYIALNV---------DDSRIGQTATKQ--KTNSPAWHDEFVTDVCNG-----RKIELAVFHDAPIGYDDFVANCTIQFEELLQNGSRHFEDWIDLEP-----------------------------------EGKVYVIIDL |
9 | 4ihbA | 0.11 | 0.08 | 2.91 | 0.90 | Neff-PPAS | | FMLRVFILYAENTDISDAYCSAVFA----------GVKKRTKV--IKNSVNPVWNEGFEWDLKGIPLDQGSELHVVVKDHETMGRNRFLGEAKVPLATPSLSASFNAPLLDTK---------------------------------KQPTGASLVLQVSY |
10 | 1gmiA | 0.13 | 0.09 | 3.03 | 0.68 | HHsearch | | GLLKIKICEAVSLKPLDPYIALNV---------DDSRIGQTATKQ--KTNSPAWHDEFVTDVCNG-----RKIELAVFHDAPIGYDDFVANCTIQFEELQNG-SRHFEDWIDLEP-----------------------------------EGKVYVIID- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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