>PF07112 (394 residues) EVYRISRDLSESKDFKKYILYKSNNLMSVSCSEDDWHYCLLVLQYVKPISSVKTITEILE FFLKRDRYRDKFDSNWGYLNTTIKKVISESSQANLIGSSYYLNTRELIQYNAINSPLSNY PIKSSCKVENVLKVFNFFSCFFLDTCKYSGLLTDHEIVITSSHNSVIKISMFGGLLNYFD LMIFMGILYNYKLFSSYSMSNIVNINFSSFDTLLHDNGSYRGKYINSLIKLSKVHLEGTY ITMSSKSNHEVCEFSGSLLSFNRISMKSSTDVYIYLSEPILHMLQSMCNYSIVNWNSFVY LSDPKVRSVYFYFCLNVKLSRYFTVFSVDKILHDLYVSSCMDTSIRFRKSKIRKILMKIF DLQSSLIDFEFQLVFSSCKSKIINGIKVRRNKIA |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | EVYRISRDLSESKDFKKYILYKSNNLMSVSCSEDDWHYCLLVLQYVKPISSVKTITEILEFFLKRDRYRDKFDSNWGYLNTTIKKVISESSQANLIGSSYYLNTRELIQYNAINSPLSNYPIKSSCKVENVLKVFNFFSCFFLDTCKYSGLLTDHEIVITSSHNSVIKISMFGGLLNYFDLMIFMGILYNYKLFSSYSMSNIVNINFSSFDTLLHDNGSYRGKYINSLIKLSKVHLEGTYITMSSKSNHEVCEFSGSLLSFNRISMKSSTDVYIYLSEPILHMLQSMCNYSIVNWNSFVYLSDPKVRSVYFYFCLNVKLSRYFTVFSVDKILHDLYVSSCMDTSIRFRKSKIRKILMKIFDLQSSLIDFEFQLVFSSCKSKIINGIKVRRNKIA | |||||||||||||||||||
1 | 1repC | 0.10 | 0.05 | 1.88 | 1.00 | CNFpred | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------RIVQSNDL-SLSRDQKRMLYLFVDQIRKS-----DGICEIHVAKYAEIFGLSAEASKDIRQALKSFAGKEVVFYESFPWF--IKPAHSPSR-------------GLYSVHINPYLIPFFIG-NRFTQFRLSETKEITNPYAMRLYESLCQYRK-GSGIVSLKIDWIIERYQLPQSYQRMPDFRRRFLQVCVNEINSR------TPMRLSYIEKK-RQTTHIVFSFRDIT | |||||||||||||
2 | 2z9oA | 0.08 | 0.04 | 1.70 | 1.61 | HHsearch-2 | ------------------------------------------------------------------------------------------------------------------------------------------------------------------SNDLTEA---AYSLSRDQKRMLYLFVDQIR-------DGICEIHVAYAEIFGLTSAEASKDIRQALKSFAGKEVVFYRPEEDAGDEKGY--ESFPWFIKR-AHSPSRGLYSVHINPYLIPFFGLQNRFTQFRLSETKEITNPYAMRLYESLCQYRKPSG-IVSLKIDWIIERYQLPQSYQR-MPDFRRRLQVCVNEINS----RTPMRLSYIEKKKGR-QTTHIVFSFRDIT | |||||||||||||
3 | 2z9oA | 0.08 | 0.04 | 1.70 | 1.78 | HHsearch | ------------------------------------------------------------------------------------------------------------------------------------------------------------------SNDLT---EAAYSLSRDQKRMLYLFVDQIR-------DGICEIHVAKAEIFGLTSAEASKDIRQALKSFAGKEVVFYRPEEDAGDEKGY--ESFPWFIKRA-HSPSRGLYSVHINPYLIPFFGLQNRFTQFRLSETKEITNPYAMRLYESLCQYRKPSGI-VSLKIDWIIERYQLPQSYQR-MPDFRRFLQVCVNEINS----RTPMRLSYIEKK--KGQTTHIVFSFRDI- | |||||||||||||
4 | 2z9oA | 0.09 | 0.05 | 1.85 | 1.36 | SP3 | ------------------------------------------------------------------------------------------------------------------------------------------------------------------SNDLTEAAY---SLSRDQKRMLYLFVDQIR-------DGICEIHVAKYAEIFLTSAEASKDIRQALKSFAGKEVVFYRPEEDAGDEKGYESFP--WFIKRAHSPSRGL-YSVHINPYLIPFFIGLNRFTQFRLSETKEITNPYAMRLYESLCQYRKPGSGIVSLKIDWIIERY----QLPQSYQRMPDFRRRFLQVCVNEINSRTPMRLSYIEKKKGRQ-TTHIVFSFRDIT | |||||||||||||
5 | 5x6xC | 0.11 | 0.10 | 3.77 | 0.58 | SPARKS-K | LAKKYAQDVSMSSGTHVHIIDGSVEITVYRTFRTIATQLLIVVFVTVDKSVVS--TQVMKSIAWAFRLRNQSVDS-STLVSKLENLVSFAPLYNVPKCGPDYYGPTVYSELLSLATNARTHWYATIDSMFTRSVLTGFVAKYFNEEAVP--IDKRIVSIVGYNPHGIRPTYIEGPFGQIKLLCLDTFMLSTSMNILYYPATHLSLQLNGWTILAFDPKIT-SDWTDAMAKATGAK------VIGVSKEFDFKSFSVQANQLNMFQN---SKLSVIDDAYFEWLIDRSIDVRLISMKWNRS-KDTSVSHLLALLPPYGASIREMRAFFTEKYMDDFTMITTVGDNSSNSKERVLKFLSDANKAKAMVVFGAPNTHRLAKKVGLVLAIKMSKDLIT | |||||||||||||
6 | 2nraC | 0.11 | 0.07 | 2.36 | 0.76 | FFAS-3D | -----------------------------------------------------------------------------------------------------------------------------------------------------------------NKKTKIRHRNELNHLPLPAKRVMYMALALIDSKEPLERGRVFKIRAEDLAALAKITPSLAYRQLEGGKLLGASKISLRGDDIIALAKELNSEELDNIIEWIAYSPDEGY-LSLKFTRTIEPYIGKKNKFTTQLLTASLRLSSQYSSSLYQLIRKHYSNFKKYFIISVDELKEELIIEYKYPDFPIFKRDVLNKAIAEIKKKTE--ISFVGFTVHEKEGRKISKKFEFVVDE-- | |||||||||||||
7 | 2nraC | 0.09 | 0.05 | 2.02 | 0.74 | HHpred | ---------------------------------------------------------------------------------------------------------------------------------------------------------KTKIR---HRNELNHT---LAQLPLPAKRVMYMALALIDSKEPLERGRVFKIRAELAALAKITPSLAYRQLKEGGKLLGASKISLRGDDIIAAKELNSEELDLNIIEWIA-YSPDEGYLSLKFTRTIEPYISLINKFTTQLLTASLRLSSQYSSSLYQLIRKHYSNFKNYFIISVDELKEELIAYYKYPD-FPIKRDVLNKAIAEIKKK-TEISFVGFTVH-EK--EGKISKLKFEFVV-- | |||||||||||||
8 | 3gjxA | 0.12 | 0.12 | 4.09 | 0.62 | MUSTER | KAKHLKDSMC--NEFSQ--IFQLQFVMENSQNAPLVHATLELLRFLNPLGYIKLISTLIYKFLNVPMFRNVSLKCLTEIAEQFETLFTLTMMQ--LKQMLPLNTNIRLAYSNGKDD----------EQNFIQNLSLFLCTFLKEHGQLLEKRLNLREALMEALHYMLLVSEVEETIFKICLEYWNHLAAELYRESPFSTSASPLLS----GSQHFDIPPRRQLYLTVLSKVRLLMVSREVLVVENDQGEVVREFTDSINLYKNMRETLVYLTHLDYVDTEIIMTKK-----LQNQVNGTEWSWKNLNTLCWAISISGAMHEEDEKRFLVTVIKDLLGLCEQKRG-KDNKAIIASNIMYIVGQYPRFLRAHFEFMHETHDGDTFIKIKCRRHFVQ | |||||||||||||
9 | 3eh2A | 0.09 | 0.06 | 2.26 | 0.91 | CNFpred | ------------------------------------DGFLVNVNE-----SRAVITSLLDQIPEMFADTR-----ETVFVPVIQAGMEALKAAECAGKLFLFHT-GKLKNRDDRKLINTDKEKTLFQPGAYQTLAKECVAQ----------------------GCCVDLFLFP--NQYVDVATLSVVPQLT---------GGSVYKYASFQVEN-----DQERFLSDLRRDVQKVVGFDAVMRVRTRAVDFFGAFYMDVELAGLDG--DKTVTVEFKHD--------ESGALLQCALLYTSCAGQRRLRIHNLALNCCLADLYRNCETDTLINYMAKFAYRGVPVKAVRDTLITQCAQILACY------------------------------- | |||||||||||||
10 | 2nraC | 0.09 | 0.06 | 2.10 | 1.13 | HHsearch-2 | ------------------------------------------------------------------------------------------------------------------------------------------------------VNKKTKIRH---RNELNHT---LAQLPLPAKRVMYMALALIDSKEPLERGRVFKIRAELAALAKITPSLAYRQLKEGGKLLGASKISLRGDDIIAAKELNSEELDLNIIEWI-AYSPDEGYLSLKFTRTIEPYISLINKFTTQLLTASLRLSSQYSSSLYQLIRKHYSNFKNYFIISVDELKEELIAYYKYP-DFPIFKRDLNKAIAEIKKK-TEISFVGFTVH-EKEGR-KISKLKFEFVVDE | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |