Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | WNLFLAFIPLALSVWLFRRSSGNRNLLWWVGFIVFMAFLPNAPYLLTDIIHLIDAVRRDYSVWVITLVLIPQHLSVILLGFEAYVISLINLGYYLQKQGMGKFTIPAELITHALCAVGIYLGRFLRFNSWDLVTQPEDLAQTIVDDLTAKRPLLVMFVTFIVLTV |
1 | 6iz3A | 0.12 | 0.11 | 3.89 | 1.01 | SPARKS-K | | FPFFDMAHYLASVMSARELDIASHSPMASWFSAMLHCF---GGGILSSILLAETNIMLASAIWYMVYYFLPIRLIAAGMKEVTRTWKILSGITHAHSHYKD--AWLVMITIGWARGAG---GGLIS-NFEQLVRVTLIGAVLFTLQHGISRHNLMFIYTMFLVSI |
2 | 3rkoC | 0.09 | 0.08 | 3.02 | 1.04 | CNFpred | | GVEYLLMLGFFIAFAVKMPV---VPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYG----LLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQT----DIKRLIAYTSVSHMGFVLIAIYTG-------SQLAYQGAVIQMIAHGLSAAGLFILCGQLYE |
3 | 4tkrA | 0.08 | 0.08 | 3.12 | 1.07 | Neff-PPAS | | -LIILLECAIFAAVAMVLSFIPLDSLGMIPMYVIAIRRGFWAAGFAGLLWGLLHFLTGKAYILMPSQAIIEYILAFSFIAFSGVFSKQVRSNLAANQLKKAIEWAWGTMIIGGVARYFWHYVAGVLFWGAYAFQGWGAQLFSIVMNGASCLGTVLVSGIIISILL |
4 | 5kbwA | 0.08 | 0.07 | 2.92 | 1.00 | SPARKS-K | | SIKKISFVGIFSALATLVMFLEFPIFPQASFLKYDPSE------IPALIVSFLLGPGVGMFVVLVKDILFFLMPVGIAMNAVLGMSFVGIAGLIYHRNKSRATAIKGMIVATLFATAFALGLNALIVPLYFE--APFELYLKFFPFILAFNLVKFGIDSVVTFFV |
5 | 6eyuA | 0.11 | 0.10 | 3.73 | 0.88 | FFAS-3D | | --GIIHFFIVVWSGLMYTNFLNQSFLSDYAWYMDWMVSTP---LILLALGLTAFHGADTKRYDLLGALLGAEFTLVITVGVLLLLGVVYLLAKPFREIAEESSDGLARAYKILAGYIGIFFLSY--PTVWYIILDPTQIALVVLPFFCKQVYGFLDMYLIHKAE- |
6 | 3emlA1 | 0.13 | 0.08 | 2.74 | 0.23 | HHpred | | -FFACVLVPLLLMLGVYLRRRQLVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLSH-TNSVVNPFIYAYRIREFRQTFRKIIRSHV-------------------------------------------------------------- |
7 | 4rfsS | 0.12 | 0.12 | 4.08 | 0.97 | MUSTER | | KTFRLVVDALLMAIVLLQNLVPFLGLIGLTVIVAGSAL---GFWGLITFVRAF-TWPSSPVAPLIFTNPLISILPRLLMGLVAGSLYLWGRHRQWSMRQAMQVAAGCAALTNTVLVLGLVFLFYQ-GYVLMISLFTNGIPELILDVLVAPLIAMPLRRQWERLKP |
8 | 5gpjA | 0.11 | 0.10 | 3.75 | 0.99 | CNFpred | | LGMKIATYANARTTLEARKG--VGKAFITAFRSGAVMGFLLAANGLLVLYIAINLFKIYYGDWGGLFEAITGYGLGGSSMALFGRVGGGIYTKAADVGA---PRNPAVIADNVGDNVGDIAGMGSDFGSYAESSCAALVVASISSFGLNHELTAMLYPLIVSSVG |
9 | 4ea3B | 0.09 | 0.09 | 3.42 | 0.51 | HHsearch-2 | | LKVTIVGLYLAVGLYVILRHTKKTAIYIFNLALADTLVLLTLPFQGTDILLGFWPFG---NALCKTV-IAIDYYNMFTSTFTLTAMSVDRYVAICHLDVTSSKA-QAVNVAIWALGVPVAIGSAEIIPTPQDYWGPVFAICIFLFSFIVPVLVISVCYSLMIRRL |
10 | 5kbwA | 0.08 | 0.07 | 2.88 | 0.94 | Neff-PPAS | | FVGIFSALATLVMFLEFPIFPQASDPSEIPALIVSFLLGPGVGMFVVLVKDILFFLMKSGD------------PVGIAMNAVLGMSFVGIAGLIYHRNKSRATAIKGMIVATLFATAFALGLNALIVPLYFEA--PFELYLKFFPFILAFNLVKFGIDSVVTFFV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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