Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | EYTIDYQLPVITINNFDQLKTAVEAYANKYQGMAVTASTEKESKSSRAELRKLKQALDDKRKEIRKKYAEPYQRFAAQIKDLEMTLDSSINPIDTGLKELEEQQRQLRLKHVNALIAEMAPNYHVEPGEVEIDPTWLNKTTTKKKVTEGIADVMGYIKKQHDDLKTGISTITKYAQAYHIDPAGWIDQLKQGQDVNYLLQAIDNQVKLN |
1 | 4tqlA | 0.10 | 0.10 | 3.69 | 1.03 | SPARKS-K | | MVQELEKARDRMEKLYKEMVELIQKAIELMRKIKAIEEMKKLYDEAKKKIEQMIQQIKKRAKEEMKKVKDKMEKLLEKLKQIMQEAKQKMEKLLKQLKEEMKKMKEKMEKLLKEMKQRMEEVKKKMDDE-LLEKIKKNIDDLKKIAEDLIKKAEENIKEAKKIAEQLVKRAKQLIEKAKQVAEELIKKILQLEKAKEIAEKVLKG---- |
2 | 1cunA | 0.08 | 0.07 | 2.67 | 1.29 | FFAS-3D | | --------------DMDDEESWIKEKKLLVSSEDYGRD-LTGVQNLRKKHKRLEAELAAHEPAIQSEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQ---FVANVEEEEAWINEKMTLVA--------SEDYGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNNHHVENITAKMK---GLKGKVSDLEKAAAQ- |
3 | 5nnvA | 0.06 | 0.06 | 2.68 | 1.38 | Neff-PPAS | | EELAESSAISAKEAKIEDTRDKIQALDESVDEKEVLKERKKNAVQNQEQLEEAIVQFQQKETVLKEELSKQEAVFETLQAEVKQLRAQVKEKQQLSNELTELKIAAAKKEQACKGEEDNLARLKKELTETELALKEAKEDLSFLTSESSSTSGEEKLEEAAKHKLNDKTKTIELIALRRDQRIKLQHGLDTYERELKEKRLYKQKTTLL |
4 | 4uosA | 0.13 | 0.11 | 3.62 | 0.94 | SPARKS-K | | ----------------------------------------GDNEEVKKMLEKMIEEIKKMLEKAIKKVKEMLEKMIKEIKKMLEKAKEMAEKILKMVIELAEKILKKAKEMAEKILKKVKELGV------DNEEKMLEKKKMLEKAIKKVKEMLEKMIKEIKKMLENSEKILKKAKEMAEKLKMVIELAEKILKAKEMAEKILKKVKEL |
5 | 3pdyA | 0.13 | 0.11 | 3.98 | 1.26 | FFAS-3D | | --------------YLQDLLAWVEENQHRVDGAEWGVD-LPSVEAQLGSHRGLHQSIEEFRAKIERARSDERGAYRDCLGRLDLQYAKLLNSSKARLRSLESLHSVAAATKELMWLNEKEEEEV--------GFDWSDRNTNMTAKKESYSALMRELELKEKKIKELQNAGDRLLREDHPARPTVESFQAALSWMLQLCCCIEAHLK-- |
6 | 4kqtA | 0.14 | 0.10 | 3.41 | 0.30 | HHpred | | --THGPALPGVCIFSSPRAVGSSLVGKAVDA------RLKTIIQQVNAELTGERTALDNEAKALDAKKTTAQDALEQQAATLANAWQRKGQLRQKEVEATEQKALSRVYQELNTPIQQVYQAQKCS---VLLDREAVL-ANPA-DITDAVVAALDARIK-------------------------------------------------- |
7 | 5xeiA | 0.11 | 0.11 | 3.81 | 0.93 | MUSTER | | KF-IKMSPLE-EISGIAEYDAKKEKALEELKQA---EENLARVDLLIKEVKKQLDKLEKERNDALRYLDLKERLERARVALLLGEIKRLESMIDEGERKRAENTIKVKSAQLRIQLEEKRRELK--HFDAALIRSVKEVSLDLEVLRKEIEDMEAEIKALEPVNMKAIEDFEVVERRYLELKSKREKLEAEKESIIEFINEIEKEKKNV |
8 | 4tqlA | 0.14 | 0.11 | 3.94 | 0.77 | CNFpred | | ---------------FQEVKQEVEKAIEEMKKLYEAKKKIEQMIQQ-QKMEELLKRAKEEMKKVKDKMEKLLEKLKQIMQEAKQKMEKLLKQLKEEMKKMKE-KMEKLLKEMKQRMEEVKKKM----------------DELLEKIKKNIDDLKKIAEDLIKKAEENIKEAKKIAEQLVKRAKQLIEKAKQVELIKKILQLIEKAKEIA |
9 | 6gmhQ | 0.13 | 0.11 | 4.01 | 0.46 | HHsearch-2 | | QFSSSFVLPFFGRGDKENASQCFEKVLKAYPNN---YETMKILGSLYAASEDQDIAKGHLKKVTE-QY--P-DDVEAWI-ELAQILEQ--TDIQGALSAYGTATRLGNLGEAKKYFLASLDRAKAEA---EHDEHY------YNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMKGNFYEASDWFKEALQIN |
10 | 5goxA | 0.12 | 0.10 | 3.40 | 1.10 | Neff-PPAS | | --------------------------------------EINQTRDRLAKLNKELASSEQNKNHINNELKRKEEQLSSYEDKLFDVCGDFESDLDRLKEEIEKSSKQRALAGATAVYSQFITQLTDENQSCPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESELKKKEKRRDELGLVPRQSIIDLKEKEELRNKLQNVNRDIQRL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|