>PF07079 (546 residues) MEQEQMYSLCCQGFSLQMQRKFQESEEIFSRIHKRKTSAPFVLQRELLEGRILNAYFLNN LSLMAECITELEKVSGVEAHLLFFKALHAYRTKQYHLAVDVLSRWFGHVDQTKPFCLDTN VYELFSPYVLEEMAAESLIGARRYAEGRIVINSVFNKIFAREYAWSVDMYNRLVLMLGQS YLLELQEGVRSDLLPEYYETILFYQKQMKGFDAVAYKTFFPESMLVPTIMQHIFVIPETQ LPLFMDALLMWENSYVHPDYSLVLERMKPAVLQDGIRTQKICQAIADSKIEKLKEKLIEL FSDELVFCVSQGNTVCADQYLALLKMLDPRSSWGHKLLLSEKEIVNMVCEDDAQYSRLKD YLLLWEEQDIADVDRQQLVHYLFFSAKHLWRGGQEEACLRLLKEILVFSQNEKACLNRTL RLVKHFYTQALAMRNFTHLVWIENFLDEVGLPKTLASDAEIANCLADAQYLFAKGDYRLC IVYSSWLARAAPSTEALQLLGLSLVEQKEYTEALEVFQRLPLGEDTWNSQVHKASLLCYK YIARQQ |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 | | | | | | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | MEQEQMYSLCCQGFSLQMQRKFQESEEIFSRIHKRKTSAPFVLQRELLEGRILNAYFLNNLSLMAECITELEKVSGVEAHLLFFKALHAYRTKQYHLAVDVLSRWFGHVDQTKPFCLDTNVYELFSPYVLEEMAAESLIGARRYAEGRIVINSVFNKIFAREYAWSVDMYNRLVLMLGQSYLLELQEGVRSDLLPEYYETILFYQKQMKGFDAVAYKTFFPESMLVPTIMQHIFVIPETQLPLFMDALLMWENSYVHPDYSLVLERMKPAVLQDGIRTQKICQAIADSKIEKLKEKLIELFSDELVFCVSQGNTVCADQYLALLKMLDPRSSWGHKLLLSEKEIVNMVCEDDAQYSRLKDYLLLWEEQDIADVDRQQLVHYLFFSAKHLWRGGQEEACLRLLKEILVFSQNEKACLNRTLRLVKHFYTQALAMRNFTHLVWIENFLDEVGLPKTLASDAEIANCLADAQYLFAKGDYRLCIVYSSWLARAAPSTEALQLLGLSLVEQKEYTEALEVFQRLPLGEDTWNSQVHKASLLCYKYIARQQ | |||||||||||||||||||
1 | 5nnpA | 0.10 | 0.09 | 3.29 | 1.32 | SPARKS-K | IDMKSYICWHVYGILYRTNKNFDEAIKAYKFALKLEPES-----HQIQRDLAVLQIQMRDYAGYVQSRLNMLKARPQIRQNWTALAIAYHLEGNLEKAEHILTTYEKSLTTPPPTIIAERLETDCDRLAVMELRASYLSKLARKDEAAKAYRALLDRNPE-----HMDYYKGLISAAQKAVYDEYAAKYPR---SDAAKRLPLFRTTAKAYLTLMFDKGVPS--TFANLKHLYSD--SFKKETLASLAEEYLNEYVNSKGKGAALYYLAQHYRDLTRALEYVEKAIELD-----PKNVDFHMTKARIFKHQGDLAKAAETMDYARSLDPKDR------YINSKAAKYQLRNN----ENEKALATMGLFTGPLADLTDCIWFLTEDGEAWQRRGNTALALKRYHTVFSIFDTWQEDQ---FDFHSFSLRKGQIRAYVDMVRWEDRLREH---------PFYFRAALDAVNLYLSMYDLGDAMKFLNYILQFSPNIDGQIAGFEVYIRKKKYLLALRCLKAAAIDKN--HPKVLEQAAKLRKIVSSAL | |||||||||||||
2 | 5o9zG | 0.10 | 0.09 | 3.49 | 2.24 | FFAS-3D | TNPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEAAVVAQAVRAELETDIRAKKRVLRKALEHVPNSVRL----WKAAVELEEPEDARIMLSRAVECCPTSVELWLAENARKVLNKARIWITAAKLEEANGNTQMVEKIIDRAITSLRANGVEINREQWIQDAEECCQAVMRAVIGGIEEEDRKHTWMEDADSCVAHNALECARA------------IYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEVLWLMGAKSKWPAARSILALAFQEIWLAAVKLESENDEYERARRLLAKARSSAPTARVFMKSVKAQDLCEEALRHYEDFPKLWMMKGQIEEQKEMMEKAREAYNQGLLLLSRLEEKIGQLTRARAILEKSRLKNPKNPGLWLESVRLANTLMAKALQECP--NSGILWSEAIFLEARPQRRTKSVDALLLAVAKLFWSQRKITKAREWFHRTVKIDSDLDAWAFFYKFELQHGTEEQQEEVRKRVSKDIANWQKKIGDILRLVAGRIKN-- | |||||||||||||
3 | 5nnpA | 0.12 | 0.11 | 3.74 | 0.86 | HHpred | -----KSYICWYGILYRTNKNFDEAIKAYKFALKLEPESHQIQ-RDL----AVLQIQMRDYAGYVQSRLNMLKARPQIRQNWTALAIAYHLEGNLEKAEHILTTYEKSLTTPPDQHLETDCKHCLDRLAVMELRASYLSKLARKDEAAKAYRALLD--------RNPEHMDYYKGLI-SALDI-----SA----DDEEAQKAVYDEYAAKYPRAAPLNFLSGERFAKAYLTLMFD---KGVPST---FANLKHLYSDSFKKETLASLAEEYLNGSKGKGAALYYLAQSRLEYVEKKNVDFHMTKARIFKHQGDLAKAAETMDYARSLDPKDRINSKAANNALATMGLFTRAEGPLADLTD---------------MQCIWFLTEDGEAWQRRGNTALALKRYHTVFSFDQFDFHSLRK---GQIRAYVDMVREHAVNLYLSMYDKP--KDDDP-------------NGEKLATKDPLGDAMKFLNYILQFSPKNIGQIAGFEVYIRKKKYLLALRCLKAASAI-DKNHPKVLEQAAKLRKIVSSA- | |||||||||||||
4 | 2xpiA | 0.08 | 0.08 | 2.93 | 1.38 | MUSTER | ASREDYLRLWRHDALMQQ--QYKCAAFVGEKVLDITGN------PNDAFWLAQVYCCTGDYARAKCLLTKEDLY-NRSSACRYLAAFCLVKLYDWQGALNLLGETNPFRMQDGGIK---------LEASMCYLRGQVYTNLSNFDRAKECYKEALMVDAKCYEAFDQLVSNHLLTADEEWDLVLKLNYSTYSKEDAAFLRSLYMLKLNKTSHEDELRRAEEKSSDLLLCKADTLFV-RSRFIDVLAITTKILEIDPYNLDVYPLHLASLHESGEKNKLYLISNDLVDRHPEK-----AVTWLAVGIYYLCVNKISEARRYFSKSSTMDPQFGPAWIGFAHSFAIEG-------EHDQAISAYTTAARLFQGT------HLPYLFLGMQHMQLGNILLANEYLQSSYALFQYDPLLLNELGVVAFNKMQTAINH--FQNALLLVKKTQSNE-------KPWAATWANLGHAYRKLKMYDAAIDALNQGLLLSTDANVHTAIALVYLHKKIPGLAITHLHES-LAISPNEIMASDLLKRALE------ | |||||||||||||
5 | 6c9mA | 0.10 | 0.10 | 3.62 | 1.57 | CNFpred | NDLKSHVCWHVYGLLQRSDKKYDEAIKCYRNALKWDK------NLQILRDLSLLQIQMRDLEGYRETRYQLLQLRPAQRASWIGYAIAYHLLEDYEMAAKILEEFRKTQQTSPDK-------VDYEYSELLLYQNQVLREAGLYREALEHLCTYEKQICDKLAVTKGELLLQLRLEDAADVYRGLQERNPE--NWAYYKGLEKALKPAMLERLKIYEEAWPRGLVPRRLPLNFL------GEKFKECLDKFLRMNFSKGCPPVFNTLR-SLYKDKEKVAIIEELVVGYETSL-PPTTLLWVQYYLAQHYDKIQPSIALEYINTAIESTPTLIELFLVKAAARWMDEAQALDTADRFINSKCAKYMLKAN-LIKEAEEMCSKF-SAVENLNEMQCMWFQTECAQAYKAMN--KFGEALKKCHEIERHFIEITDDDFHTYCMTLRSYVDLLKLEDVLRQHPFYFKAARIAIEIYLKLPLEEAIKFLTPLKNLVNKIETHLFAFEIYFRKEKFLLMLQSVKRAF--IDSSHPWLHECMIRLFNTAVCES | |||||||||||||
6 | 6gmhQ | 0.13 | 0.11 | 3.80 | 0.56 | HHsearch-2 | ATQFSSFVFFGLGQMYIYRGDKENASQCFEKVLKAYPNNYEHLKVEAWIELAQ-ILEQTDLSAYGTATRILQEQADVPPEILNNVGALHFRLGNLGEAKKYF---LASLDRAKANAISV---------TTSYNLARLYEAMCEFHEAEKLYKNILR---EH--PNYVDCYLRLGAMARSDWFKEALQIN-----QDHPDAWS--------------------------LIGNLHLAK-QEWGPFERILKQP--STQSDTYSMLALGNVWQTLHQPTRD---------REKERHQDRALAIYKQVLRND---AKNLYAANGIGAVLAHKGYF-------REARDVFAQVRADIDVWLNLAHIYVYISAVQMYENCLRQNTEVVLYLARALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVL-QRLATSVLKDEKSNLKEVLNAVKELELSKLALAATEARQC----SDLLSQAQYHVARAR-----KQDEEERELRQQEKELLRQKLLKEQEEKRLRLLEQRAQYVEKTKNILMFT-------- | |||||||||||||
7 | 2xpiA | 0.08 | 0.07 | 2.79 | 2.01 | Neff-PPAS | ---SREDYLRLWRHDALMQQQYKCAAFVGEKVLDITGN------PNDAFWLAQVYCCTGDYARAKCLLTKED-LYNRSSACRYLAAFCLVKLYDWQGALNLLGETNPFRMQDGGIK---------LEASMCYLRGQVYTNLSNFDRAKECYKEALMVDAKCYEAFDQLVSNHLLTADEEWDLVLKLNYSTYSKEDAAFLRSLYMLKLNKTSHEDELRRAELEKSSDLLLCKADTLFVRSRFIDVLAITTKILEIDPYNLDVYPLHLASLHESGEKNKLYLISNDLVDRHPEK-----AVTWLAVGIYYLCVNKISEARRYFSKSSTMDPQF-------GPAWIGFAHSFAIEGEHDQAISAYTTAARLFQGT------HLPYLFLGMQHMQLGNILLANEYLQSSYALFQYD-------PLLLNELGVVAFNKSDMQTAINHFQNALLLVKKTQSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGLLLSTDANVHTAIALVYLHKKIPGLAITHLHES-LAISPNEIMASDLLKRALE------ | |||||||||||||
8 | 5nnpA | 0.12 | 0.11 | 3.82 | 0.85 | HHsearch | ---TREANLFRTVIRHYEDKQYKRGLKAAEQILKKNPKHG-----DTMSMKALILNAQGKTEEAFALAKEALTIDMKSYICWHVYGILYRTNKNFDEAIKAY---KFALKLEPSHQ-------------IQRDLAVLQIQMRDYAGYVQSRLNMLK---ARP-----Q-IRQNWTALAIAYHLEAEHTKSLTTPPELLYKNTIIAERGDIERALHLETDCLDRLAVMELRASYLSKL-ARKDEAAKAYRALL--DRNPEHMDYYKGLISALDADEEAQKAVYDEYAAKYPRETLASLAEEYLNEYYLANYSRDLTRALEYVEKAIELDPKNVDFHMTKAAAETMDYARSLDPKINSKAAKYQATMGLFTAEGGPLADLIWFLTEDGEAWQRRGNTALALKRYHTVFSIFDTWQEDQFDFHSF-------SLRKGQIRAYVDMVRWEDRLREHPF---YFRAALDAVNGEKLATKDPLGDAMKFLNYILQFSPKNIDGQAGFEVYIRKKKYLLALRCLKAIDKN----HPKVLEQAAKLRKIVSSA- | |||||||||||||
9 | 4uzyA | 0.10 | 0.10 | 3.51 | 1.69 | PROSPECTOR2 | QQPARPIQYTQTIYTLIKEQKFAEAIQHLQYQLQNVPES-----RAALSLLGYCYYYTGQYDMASQMYEQLVTLYPSNEDYKLYYAQSLYKGGMYPEASKAVRRQLDKCAPEDPDTMVNTGCIMFYQPELLYNIALCYYKTKQFGPALKHLAEIIEKAMEVRSVGNSQTLKETALIEAFNLKAAIEYTMKN------VEAAKEALTDMPPRAEEE----LDPVTLHNSALINMDSDPTGGFKKLNFLLQ------SPPFPPETFANLLLLYCKPSHGFYDLAADVLAENPQYAGKLLSPDLYDYLQAAI--GRYKSPEEAFRRFDEL----ATRHVEQLRRLTKQIQDARIARDNDAIKRAINEYDEA------LEAYIPGLMAMASIYWDMELYSNVEKIFRQSAEFCSEHEVWKLNVAHTFFMYYEPVVKKNAMRKVEKEEERSSMQDPDKPCFHLCIINLVI--GTLYCAKGNYEFGVSRIIKSLEETDTWYYAKRCFLALIENSSFTEIMAFLNEAIRVVFNQSRTIASEARMLKKMFLKLR | |||||||||||||
10 | 6af0A | 0.09 | 0.08 | 3.08 | 0.51 | SAM | -EQSPRIYWMTVALAYAKQNKIDFAIEMLLRGANVLQGN-----MLAVMGKARALFSLGRYPESLAAYQDVVAKMPDDPDPRIGIGCCFWQLGFKDDAKIAWERCLEINPDAMTEYTQKSFKLDKNLPLTCATFAGYFLSRKQFGNVDALAHKAIQ--------DVN---ADGWYLLARKEHYDGNLERASGYLPAKFGAAQLSVLKNDLGEAKRLEKMHSKNYEAMILLGTLYAEESAEAKKAISLLEGVRSLSPDAAVLLNLARLY-E-SESPDKALQCLQQVEQLEIDQLP---PQLLNNIGCFYSQEGKHRLATEFFQAALDSCAR-------LDIDALLTTIPFNLGRSYEYEGDIDKAIETYEQLLSRHSDYTDARTRLAYIKLRRNPNKEGPDAVAKLYQENPSDLEVRGLYGWFLSKVYKHTLQSYDKH----------------------DRYALVGMGNLHLRSKDYKNALQIFIKVRETIQDAHVYVNMGHIYAELRQFSKAIESYEIALSKEGANDAGIISCLGRTWLNKGR-- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |