Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| Seq | MSGKYNYAGLTKELHQRLVFEFNALKEKHPRTFTHHIMKTKQCNRQYARKYCQRFDKVIKERSKLSFSTLDDMSEYLTEGLVNDLQEYLSEHYSAPRWSCKTDSDKTNAGLTEELFLQYRNEIQELRAAHPNCFANYIMEVKGCSNQQAKTICTAINTIYTEIGILTPRKVVQLEGLLSRELFGKIAKHVFNKYEWPESLDSEVDRIYLEYRTKGDLGLEKESVKRALYKAIYMGL |
1 | 4uosA | 0.10 | 0.08 | 2.81 | 0.67 | SPARKS-K | | -----GDNEEVKKMLEKMIEEIKKMLEKAKEMLEKMIKEIKKMLENDSEKILKKAKEMAEKILKMVIELAEKILKKAKEMAEKILKKVKELG----------VDNEEVKKMLEKMIEEIKKMLEKAIKKVKEMLEKMIKEIKGEDSEKILKKAKEMAEKILKMVIELAEKILKKAKEMAEKILKKVKELGVG-------------------------------------------- |
2 | 5tptA | 0.15 | 0.11 | 3.57 | 0.94 | FFAS-3D | | ----FETSADDNE-HARFQKAKEQLEIRHRNRMDRVKKEWEELPKAERQTLIQHFQAMVKEKQQLVETHLARVEAMLNDRRRMALENYLAA-------------LQSDPPRPHRILQALRRYVRAENKDRLHTIRHY-QHVLAVDPEKAAQMKSQVMTHLHVI----EERRNQSLSLLYKYVAQEIQEEI---------------------------------------------- |
3 | 6gmhQ | 0.17 | 0.15 | 5.00 | 0.42 | HHpred | | ------YAASDQEKRDIAKGHLKKVTEQYPDDVEAWIELAEQTDIQGALSAYGTATRILQEQADVPPEILNNVGALFRLGNLGEAKKYFLASLDRAKAEAEHDEHYYNACEFHEAEKLY----KNILREHPNYVDCYLR--LGAMARDKGNFYEASD-WFKEALQINQDH------PDAWSLIGNL---HLAKQEWGPGQ-KKFERVWLQLHQ---PTRDREKEKRHQDRALAI-- |
4 | 4tqlA | 0.12 | 0.11 | 4.01 | 0.77 | MUSTER | | MVQELEKA---RDRMEKLYKEMVELIQKAIELMRKIFQEVKQEVEKAIEEMKKLYDEAKKKIEQMIQQIKQGGDKQKMEELLKRAKEEMKKVKDKMEKKLKQIMQEAKQKM-EKLLKQLKEEMKKMKEKMEKLLKEMKQRMEEVKKKLLEKIKKNIDDLKKIAEDLKAEENIKEAKKIAEQLVKRAKQLIEKAKQVAEELIKKILQLI-------------EKAKEIAEKVLKG-- |
5 | 3edvA | 0.08 | 0.08 | 2.96 | 0.69 | CNFpred | | -----------TMLQERFREFARDTGNIGQERVDTVNHLADELIAATIAEWKDGLNEAWADLLELRTQILAASYELHFYHDAKEIFGRIQDKHKKLPEELGRDQNTVE--TLQRMHTTFEHDIQALGTQQLQEDAARLQAAYGDKADDIQKRENEVLEAWKSLLDACESRRVRLVDTGDKFRFFSMVRDLM---LWMEDVIRQIEAQ--------EKPRDVSSVELLMNNHQGIKA |
6 | 6gmhQ | 0.16 | 0.15 | 4.93 | 0.45 | HHsearch-2 | | YPNNSLYAASDQEKRDIAKGHLKKVTEQYPDDVEAWIELAEQTDIQGALSAYGTATRILQEQADVPPEILNNVGALFRLGNLGEAKKYFLASLDRAKAEAEHDEHYYNAISVTTSYNEAEKLYKNILREHPNYVDCYLR--LGAMARDKGNFYEASD-WFKEALQINQPDAWSLIGNL-----------HLAKQEWGPGQK-KFERVWLQLHQ---PTRDREKEKRHQDRALAIYN |
7 | 4tqlA | 0.10 | 0.09 | 3.33 | 0.84 | Neff-PPAS | | --------------YKQMVQELEKARDRMEKLYKEMVELIQKA-IELMRKIFQEVKQEVEKAIEEMKKLYDEAKKKIEQMIQQIKQGGDKQKMEELLKRAKEEMKKVKDKM-EKLLEKLKQIMQEAKQKMEKLLKQLKEEMKKMKEKMEKLLKEMKQRMEEVKKKMELLEKIKKNIDDLKKIAEDLIKKAEENIKEAKKIAEQLVKRAKQLIEKAKQVAEIKKILQLIEKAKEIAE |
8 | 4l3iA | 0.15 | 0.12 | 4.14 | 0.43 | HHsearch | | VCEDEDAFCLSLENIATLQKLLRQLE-QKS-QNEAVCEGLRTWDRLQIEEEREAVATI----SGSKAKVRKALQLEVDEAIRVELVQYWDQCFYSQE--QRQAFAPFCAEYTESLLQLHDAEIVRLKNYYEVHKE--LFENRGGNLLKEEKQRAKLQK--------LPK--------LEEELKARIELWEQEHFVNGQKF-EYVAEQWE-HRL------EKERAKQER-------- |
9 | 5ef4A | 0.17 | 0.14 | 4.76 | 0.72 | SP3 | | HSHMFHYHERELESEEGFMGMYDRWREQHNIEM----------RSPERFNVFKYNVRRIHESNKMDKPTNLEFVNTYANS---KISHFQALRGSAPGSKDFIYANVTK--IPDKV---------DWREK------NAVTDVKGCGSCWAFAAVVALEGINAIRTKFSEQQLVDCDMTNAEPAFTYVIKHIAPEASYPYVGKRDKAKIKDVLKIDGRQGLDEEALRKAVAHPVATGI |
10 | 2yfaA | 0.09 | 0.08 | 3.03 | 0.84 | PROSPECTOR2 | | GRLQYMIANGDDTAAANTLAKLDAFSKQKSPENVKLLGELGD-TISAYKLSLNKMRQGYDATRAARVSMDSSAIRADQ--AMDALSQEVMA-----------------RPEADSVRLAQYQLISKARQQLLQVRIDVRGYIAENSSANEQAALRQLDAALADTDNLLPSEDARLQQFENRDAVRQFRDAVANITTSRAEMTVQGADI--------------VKRSDALYQIQL-ER |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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