Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | LSEAETKALSECAAEAFIGRSLPLMILGGVGTYVAVSKGKLSPNPRWGATPKVILACTIAYFIGQMSYEHVCRQKLMAIPDS |
1 | 5cwcA1 | 0.12 | 0.11 | 3.89 | 0.87 | SPARKS-K | | KEELRERLVKICVENAKRKEAREAAREAFELVREAAERAGIDS------SEVLELAIRLIKECVENAQREACRAAAEAFKRV |
2 | 2lorA | 0.13 | 0.12 | 4.23 | 0.67 | FFAS-3D | | ---DDAVAAKACQSHAFMK-GVFTFVTGTGMAFGLQMQRKFPYPLQWSLLVAVVAGSVVSYGVTR-VESEKCNNLWLFLETG |
3 | 2lorA | 0.10 | 0.10 | 3.57 | 0.33 | HHpred | | --DDAVGEYAACQSHAFMKGVFTF-VTGTGMAFGLIQRKFP-YPLQWSLLVAVVAGSVVSYGVTRVE-SEKCNNLWLFLETG |
4 | 5hamA | 0.15 | 0.15 | 4.94 | 0.66 | MUSTER | | KGEEKNKILAEVQETIKIANLIPDKEERALMLGDAKKREEILKLSDA-EREKLKNDLLRGGEAQQQINEDILNRATKDIKDN |
5 | 4mt1A | 0.10 | 0.10 | 3.60 | 0.67 | CNFpred | | ---VLAALYESWSIPLAVILVIPLGLIGAAAGVTGRNLFESVPSFANDIYFQVGFVTVMGLSAKNAILIIEFAKDLQAQGKS |
6 | 2lorA | 0.14 | 0.13 | 4.57 | 0.42 | HHsearch-2 | | LSDDAVAEYAACQSHAFMKGVFTF-VTGTGMAFGLQMKFPYP--LQWSLLVAVVAGSVVSYGVTRVE-SEKCNNLWLFLETG |
7 | 5cwlA1 | 0.15 | 0.15 | 4.95 | 0.91 | Neff-PPAS | | TTEDERRELEKVARKAIEAAREGNTDEVREQLQRALEIARESGTTEAVALEVVARVAIEAARRGNTDAVREALEVALEIARE |
8 | 2lorA | 0.12 | 0.11 | 3.90 | 0.60 | HHsearch | | RVDDAVAEYAACQSHAFMKGVFTF-VTGTGMAFGLQMKFPYP--LQWSLLVAVVAGSVVSYGVTRVE-SEKCNNLWLFLET- |
9 | 4nhbA | 0.09 | 0.09 | 3.28 | 0.79 | SP3 | | LPEQDQKWIEEAAKRSADDVWAMVADGDEKAKATILANKGHEPSKELHEHLVNAGKRSWKLFYDTVPNAQAILDSADSYR-- |
10 | 5gp9A2 | 0.09 | 0.09 | 3.30 | 0.47 | PROSPECTOR2 | | TDVEEKILVNMHLRLKINEVLKGYLNLLDELLMEGKEKGYFFQELDTRLARQMIFGTLDEVVTNWVMLVKPVHQLLLGLRHR |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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