Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| Seq | KQDERFFDLTGSITFATVSLLALALSSDDGKRIWRAYLLTAMVWLWCVRLGTFLYLRIREVGEDTRFAGIRGNPVRFFSVWSIQGLWVFLTALPVLLSLAHSSNDSNVHVLDVVGTSLWVLGYAIEVTADHQKTQFRHDERNKGKFIQSGLWKYSRHPNYCGEILMWIAIFLIAVHTLAHRPLYQALAALGPVFVTLLLTKVSGIPLLEKQGDERWGNQQAYKEYKQRT |
1 | 4a2nB | 0.14 | 0.11 | 3.86 | 1.70 | SPARKS-K | | ------------------------------------MNENLWKICFIVMFIIWVFVRKVYGTRAMKNKSKKKVRPNFEKSLVFLNFIGMVFLPLTAVFYLDSFNINLPDSIRLFALIVTFLNIGLFTKIHKDLGNNWSAILDGHKLVKEGIYKNIRHPMYAHLWLWVITQGIILSNW----------VVLIFGIVAWAILYFIRVPKEEELLIEEFG--DEYIEYMGKT |
2 | 4a2nB | 0.16 | 0.13 | 4.20 | 1.89 | FFAS-3D | | ------------------------------NENLWKICFIVMFIIW---VFVRKVYGTRAMKNK-----SKKKVRPNFEKSLVFLNFIGMVFLPLTAVYLDSFNINLPDSIRLFALIVTFLNIGLFTKIHKDLGNNWSAIKDGHKLVKEGIYKNIRHPMYAHLWLWVITQGIILSN----------WVVLIFGIVAWAILYFIRVPKEEELLIEEFG--DEYIEYMGKT |
3 | 4quvA | 0.19 | 0.17 | 5.37 | 2.14 | HHpred | | ------LDLKFCARPGMIFWLLMAAKELHGTVTVPMLLVVGFQSFYLI----DYFI--HEEAVLTTWDIKHEKFGWMLCWGDL-VWLPFTYTLQAQYLVHHT--HDLPVWGIIAIVALNLAGYAIFRGANIQKHHFRRDPNRGSLLLTSGWWGIARHMNYFGDLMIALSWCLPAAFGSP-------IPYFHIVYFTILL--LHREKRDDAMCLAKYG--EDWLQYRKKV |
4 | 4a2nB | 0.14 | 0.11 | 3.85 | 1.64 | MUSTER | | -----------------------------MNENLWKICFIVMFIIWVFVRKVYGTRAMKNKS--------KKKVRPNFEKSLVFLNFIGMVFLPLTAVFSSYLNINLPDSIRLFALIVTFLNIGLFTKIHKDLGNNWSAILDGHKLVKEGIYKNIRHPMYAHLWLWVITQGIILSN---------WVVLIFGIVAWAILYFI-RVPKEEELLIEEFG--DEYIEYMGKT |
5 | 4quvA | 0.19 | 0.17 | 5.37 | 1.21 | CNFpred | | -----FCEARPGMIFWLLMNLSMAAKQLHGTVTVPMLLVVGFQSFYLIDYFIHEEAVL-------TTWDIKHEKFGWMLCWGDLVWLPFTYTLQAQYLVHHTHDL--PVWGIIAIVALNLAGYAIFRGANIQKHHFRRDPN-GSLLLTSGWWGIARHMNYFGDLMIALSWCLPAAF-------GSPIPYFHIVYFTILLLHR--EKRDDAMCLAKYGE--DWLQYRKKV |
6 | 4quvA | 0.17 | 0.16 | 5.18 | 2.96 | HHsearch-2 | | LDATVLYDQLGPLLTVVNIFTLYFWGPRIGSLDLKLFCARPGMIFWLLMNLSMAAKQYHEEAVLTTWDIKHEKFGWMLCWGDL-VWLPFTYTLQAQYLVHHT--HDLPVWGIIAIVALNLAGYAIFRGANIQKHHFRRDPNRGSLLLTSGWWGIARHMNYFGDLMIALSWCLPAAFGSP-------IPYFHIVYFTILL--LHREKRDDAMCLAKYG--EDWLQYRKKV |
7 | 4a2nB | 0.16 | 0.12 | 4.09 | 1.75 | Neff-PPAS | | ----------------------------MNENLWKICFIVMFIIWVFVRKVYGTRAMK---------NKSKKKVRPNFEKSLVFLNFIGMVFLPLTAVFSSYLDSFNIDSIRLFALIVTFLNIGLFTKIHKDLGNNWSAIKDGHKLVKEGIYKNIRHPMYAHLWLWVITQGIILSN----------WVVLIFGIVAWAILYFIRVPKEEELLIEEFG--DEYIEYMGKT |
8 | 4quvA2 | 0.24 | 0.12 | 3.67 | 3.36 | HHsearch | | ----------------------------------------------------------------------------------------------------------LPVWGIIAIVALNLAGYAIFRGANIQKHHFRRDPNQGSLLLTSGWWGIARHMNYFGDLMIALSWCLPAAFGSP-------IPYFHIVYFTILLL--HREKRDDAMCLAKYG--EDWLQYRKK- |
9 | 4a2nB | 0.16 | 0.13 | 4.21 | 1.42 | PROSPECTOR2 | | MNENLW----------------------------KICFIVMFIIWVFVRK---VYGTRAMKNK------SKKKVRPNFEKSLVFLNFIGMVFLPLTAVYLDSFNINLPDSIRLFALIVTFLNIGLFTKIHKDLGNNWSAILDGHKLVKEGIYKNIRHPMYAHLWLWVITQGIILSN----------WVVLIFGIVAWAILYFIRVPKEEELLIEEFG--DEYIEYMGKT |
10 | 4a2nB | 0.15 | 0.11 | 3.84 | 1.47 | SAM | | ---------------------------------------NLWKICFIVMFIIWVFVRKVYGTRAMKNKSKKKVRP-NFEKSLVFLNFIGMVFLPLTAVFSSYLDINLPDSIRLFALIVTFLNIGLFTKIHKDLGNNWSAIKDGHKLVKEGIYKNIRHPMYAHLWLWVITQGIILSNWVV--------LIFGIVA--WAILYFIRVPKEEELLIEEFG--DEYIEYMGKT |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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